Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 AC015909.5-201ENST00000624336 2266 ntBASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 ATP5G1P1-201ENST00000448724 379 ntBASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 HOMER2P1-201ENST00000455653 964 ntBASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 AC011558.1-201ENST00000623459 338 ntBASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CROCCP3Q8IVE0 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
CROCCP3Q8IVE0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 SNORA78-201ENST00000459373 127 ntBASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 VENTXP5-201ENST00000523979 775 ntBASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 AL592424.1-201ENST00000563624 1536 ntBASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 DMBT1P1-203ENST00000636837 4628 ntBASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.39□□□□□ -0.11
CROCCP3Q8IVE0 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms