Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD2Q8IV50 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 AC152010.1-201ENST00000415779 2006 ntBASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 CHCHD2P8-201ENST00000429873 447 ntBASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 MINOS1P3-201ENST00000457048 203 ntBASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 AL136038.3-201ENST00000561909 1096 ntBASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 U82695.1-201ENST00000635752 1889 ntBASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 AC131009.4-201ENST00000624048 1740 ntBASIC13.93□□□□□ -0.18
LYSMD2Q8IV50 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 MST1P2-201ENST00000457982 2291 ntBASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 TLE1-202ENST00000376484 666 ntTSL 3 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 PAWRP1-201ENST00000451083 565 ntBASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 PRYP5-201ENST00000451909 266 ntBASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 AC010331.1-201ENST00000611423 582 ntBASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 REXO1L3P-201ENST00000622202 1288 ntBASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.92□□□□□ -0.18
LYSMD2Q8IV50 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms