Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 CICP23-201ENST00000605013 2741 ntBASIC16.41■□□□□ 0.22
CCDC25Q86WR0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC25Q86WR0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC25Q86WR0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC25Q86WR0 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC25Q86WR0 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC25Q86WR0 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CCDC25Q86WR0 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 RPS2P28-201ENST00000314255 741 ntBASIC16.4■□□□□ 0.22
CCDC25Q86WR0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 AF186996.4-201ENST00000467186 377 ntBASIC16.4■□□□□ 0.22
CCDC25Q86WR0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 PMS2P7-201ENST00000506558 1336 ntBASIC16.4■□□□□ 0.22
CCDC25Q86WR0 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC25Q86WR0 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.39■□□□□ 0.22
CCDC25Q86WR0 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
CCDC25Q86WR0 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 AC026748.1-201ENST00000624349 3251 ntBASIC16.39■□□□□ 0.21
CCDC25Q86WR0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 AC002347.1-201ENST00000569543 541 ntBASIC16.39■□□□□ 0.21
CCDC25Q86WR0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC25Q86WR0 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms