Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 KRT223P-202ENST00000449164 1292 ntBASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 VDAC1P7-201ENST00000462417 847 ntBASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 RPL13AP25-201ENST00000484130 612 ntBASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 TDH-203ENST00000531764 1110 ntBASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 AC046158.3-201ENST00000624947 2558 ntBASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC62Q6P9F0 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCDC62Q6P9F0 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC62Q6P9F0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC62Q6P9F0 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC62Q6P9F0 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC62Q6P9F0 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC62Q6P9F0 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC62Q6P9F0 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC62Q6P9F0 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC62Q6P9F0 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC62Q6P9F0 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC62Q6P9F0 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC62Q6P9F0 KRT43P-201ENST00000434019 910 ntBASIC17.71■□□□□ 0.43
CCDC62Q6P9F0 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC62Q6P9F0 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC62Q6P9F0 AC104989.1-201ENST00000519711 778 ntBASIC17.71■□□□□ 0.43
CCDC62Q6P9F0 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC62Q6P9F0 CLUHP6-201ENST00000580789 941 ntBASIC17.71■□□□□ 0.43
CCDC62Q6P9F0 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.71■□□□□ 0.43
CCDC62Q6P9F0 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
CCDC62Q6P9F0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC62Q6P9F0 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CCDC62Q6P9F0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
CCDC62Q6P9F0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC62Q6P9F0 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC62Q6P9F0 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
CCDC62Q6P9F0 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC62Q6P9F0 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC62Q6P9F0 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC62Q6P9F0 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC62Q6P9F0 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 AC008894.3-201ENST00000624324 3103 ntBASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 SOCS2P1-201ENST00000417727 557 ntBASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 KRT18P43-201ENST00000469825 1281 ntBASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 AC133552.6-201ENST00000613406 534 ntBASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 PDIA3P1-201ENST00000471856 1510 ntBASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC62Q6P9F0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC62Q6P9F0 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.69■□□□□ 0.42
CCDC62Q6P9F0 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CCDC62Q6P9F0 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC62Q6P9F0 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCDC62Q6P9F0 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 190 ms