Protein–RNA interactions for Protein: Q15042

RAB3GAP1, Rab3 GTPase-activating protein catalytic subunit, humanhuman

Predictions only

Length 981 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1Q15042 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB3GAP1Q15042 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
RAB3GAP1Q15042 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3GAP1Q15042 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3GAP1Q15042 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RAB3GAP1Q15042 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB3GAP1Q15042 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB3GAP1Q15042 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 AC005622.1-201ENST00000636801 1703 ntBASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 C1R-202ENST00000536053 2347 ntTSL 2 BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB3GAP1Q15042 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 AL589702.1-201ENST00000641229 1509 ntBASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 AL009178.2-201ENST00000597278 2719 ntBASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 AC004233.3-201ENST00000607794 1269 ntBASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 AL133215.2-201ENST00000609242 977 ntBASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 AL035252.4-201ENST00000624174 288 ntBASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC19.21■□□□□ 0.67
RAB3GAP1Q15042 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3GAP1Q15042 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3GAP1Q15042 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3GAP1Q15042 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC19.2■□□□□ 0.66
RAB3GAP1Q15042 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3GAP1Q15042 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.2■□□□□ 0.66
RAB3GAP1Q15042 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RAB3GAP1Q15042 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RAB3GAP1Q15042 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.2■□□□□ 0.66
RAB3GAP1Q15042 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RAB3GAP1Q15042 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RAB3GAP1Q15042 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.2■□□□□ 0.66
RAB3GAP1Q15042 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC19.2■□□□□ 0.66
RAB3GAP1Q15042 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RAB3GAP1Q15042 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAB3GAP1Q15042 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms