Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
KCNA1Q09470 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KCNA1Q09470 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
KCNA1Q09470 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KCNA1Q09470 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KCNA1Q09470 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
KCNA1Q09470 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KCNA1Q09470 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KCNA1Q09470 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.36■□□□□ 0.37
KCNA1Q09470 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.36■□□□□ 0.37
KCNA1Q09470 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
KCNA1Q09470 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.35■□□□□ 0.37
KCNA1Q09470 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNA1Q09470 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.35■□□□□ 0.37
KCNA1Q09470 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNA1Q09470 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNA1Q09470 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
KCNA1Q09470 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNA1Q09470 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNA1Q09470 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KCNA1Q09470 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNA1Q09470 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.35■□□□□ 0.37
KCNA1Q09470 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNA1Q09470 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.35■□□□□ 0.37
KCNA1Q09470 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNA1Q09470 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KCNA1Q09470 MIR770-201ENST00000390219 98 ntBASIC17.35■□□□□ 0.37
KCNA1Q09470 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.35■□□□□ 0.37
KCNA1Q09470 RPL13P2-201ENST00000440687 659 ntBASIC17.35■□□□□ 0.37
KCNA1Q09470 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.35■□□□□ 0.37
KCNA1Q09470 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.35■□□□□ 0.37
KCNA1Q09470 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.35■□□□□ 0.37
KCNA1Q09470 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
KCNA1Q09470 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.35■□□□□ 0.37
KCNA1Q09470 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.35■□□□□ 0.37
KCNA1Q09470 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.35■□□□□ 0.37
KCNA1Q09470 ZNF890P-202ENST00000530367 1156 ntBASIC17.35■□□□□ 0.37
KCNA1Q09470 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.35■□□□□ 0.37
KCNA1Q09470 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.35■□□□□ 0.37
KCNA1Q09470 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
KCNA1Q09470 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.35■□□□□ 0.37
KCNA1Q09470 AL355385.1-201ENST00000606123 409 ntBASIC17.35■□□□□ 0.37
KCNA1Q09470 AC004461.2-201ENST00000629517 803 ntBASIC17.35■□□□□ 0.37
KCNA1Q09470 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNA1Q09470 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.35■□□□□ 0.37
KCNA1Q09470 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KCNA1Q09470 AC092384.3-202ENST00000564646 2873 ntBASIC17.35■□□□□ 0.37
KCNA1Q09470 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNA1Q09470 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNA1Q09470 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KCNA1Q09470 AC022144.1-201ENST00000602255 1580 ntBASIC17.35■□□□□ 0.37
KCNA1Q09470 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KCNA1Q09470 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KCNA1Q09470 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.35■□□□□ 0.37
KCNA1Q09470 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.35■□□□□ 0.37
KCNA1Q09470 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.35■□□□□ 0.37
KCNA1Q09470 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNA1Q09470 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
KCNA1Q09470 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNA1Q09470 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.34■□□□□ 0.37
KCNA1Q09470 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNA1Q09470 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNA1Q09470 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNA1Q09470 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNA1Q09470 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNA1Q09470 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNA1Q09470 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KCNA1Q09470 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KCNA1Q09470 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNA1Q09470 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
KCNA1Q09470 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
KCNA1Q09470 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.34■□□□□ 0.37
KCNA1Q09470 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNA1Q09470 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.34■□□□□ 0.37
KCNA1Q09470 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KCNA1Q09470 BASP1P1-201ENST00000430708 665 ntBASIC17.34■□□□□ 0.37
KCNA1Q09470 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.34■□□□□ 0.37
KCNA1Q09470 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.34■□□□□ 0.37
KCNA1Q09470 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.34■□□□□ 0.37
KCNA1Q09470 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.34■□□□□ 0.37
KCNA1Q09470 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.34■□□□□ 0.37
KCNA1Q09470 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.34■□□□□ 0.37
KCNA1Q09470 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KCNA1Q09470 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KCNA1Q09470 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.34■□□□□ 0.37
KCNA1Q09470 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
KCNA1Q09470 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KCNA1Q09470 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNA1Q09470 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
KCNA1Q09470 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNA1Q09470 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.34■□□□□ 0.37
KCNA1Q09470 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.34■□□□□ 0.37
KCNA1Q09470 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
KCNA1Q09470 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KCNA1Q09470 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KCNA1Q09470 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
KCNA1Q09470 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.33■□□□□ 0.37
KCNA1Q09470 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.33■□□□□ 0.37
KCNA1Q09470 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
KCNA1Q09470 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms