Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AL158212.4-201ENST00000624062 1286 ntBASIC15.88■□□□□ 0.13
AP1S1P61966 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.88■□□□□ 0.13
AP1S1P61966 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP1S1P61966 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
AP1S1P61966 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
AP1S1P61966 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP1S1P61966 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP1S1P61966 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.88■□□□□ 0.13
AP1S1P61966 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.88■□□□□ 0.13
AP1S1P61966 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.88■□□□□ 0.13
AP1S1P61966 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
AP1S1P61966 AL391825.1-201ENST00000457671 1364 ntBASIC15.87■□□□□ 0.13
AP1S1P61966 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
AP1S1P61966 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.87■□□□□ 0.13
AP1S1P61966 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.87■□□□□ 0.13
AP1S1P61966 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.87■□□□□ 0.13
AP1S1P61966 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S1P61966 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
AP1S1P61966 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S1P61966 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
AP1S1P61966 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S1P61966 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S1P61966 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S1P61966 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S1P61966 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S1P61966 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S1P61966 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S1P61966 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
AP1S1P61966 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S1P61966 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S1P61966 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S1P61966 AL133267.1-201ENST00000398220 340 ntBASIC15.87■□□□□ 0.13
AP1S1P61966 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S1P61966 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.87■□□□□ 0.13
AP1S1P61966 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.87■□□□□ 0.13
AP1S1P61966 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
AP1S1P61966 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.87■□□□□ 0.13
AP1S1P61966 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S1P61966 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.87■□□□□ 0.13
AP1S1P61966 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.87■□□□□ 0.13
AP1S1P61966 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.87■□□□□ 0.13
AP1S1P61966 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.87■□□□□ 0.13
AP1S1P61966 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
AP1S1P61966 AL132655.2-201ENST00000596276 594 ntBASIC15.87■□□□□ 0.13
AP1S1P61966 AC099568.2-201ENST00000609194 695 ntBASIC15.87■□□□□ 0.13
AP1S1P61966 AL391069.4-201ENST00000609583 481 ntBASIC15.87■□□□□ 0.13
AP1S1P61966 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.87■□□□□ 0.13
AP1S1P61966 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
AP1S1P61966 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S1P61966 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S1P61966 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
AP1S1P61966 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S1P61966 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S1P61966 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
AP1S1P61966 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S1P61966 SLC7A15P-201ENST00000424028 1363 ntBASIC15.87■□□□□ 0.13
AP1S1P61966 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S1P61966 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
AP1S1P61966 AC007950.2-201ENST00000615045 2347 ntBASIC15.86■□□□□ 0.13
AP1S1P61966 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP1S1P61966 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
AP1S1P61966 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP1S1P61966 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP1S1P61966 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.86■□□□□ 0.13
AP1S1P61966 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP1S1P61966 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP1S1P61966 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.86■□□□□ 0.13
AP1S1P61966 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP1S1P61966 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.86■□□□□ 0.13
AP1S1P61966 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP1S1P61966 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.86■□□□□ 0.13
AP1S1P61966 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP1S1P61966 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP1S1P61966 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP1S1P61966 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
AP1S1P61966 AC087499.6-201ENST00000411576 835 ntBASIC15.86■□□□□ 0.13
AP1S1P61966 AL353779.1-201ENST00000434793 351 ntBASIC15.86■□□□□ 0.13
AP1S1P61966 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.86■□□□□ 0.13
AP1S1P61966 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.86■□□□□ 0.13
AP1S1P61966 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.86■□□□□ 0.13
AP1S1P61966 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.86■□□□□ 0.13
AP1S1P61966 AC036164.1-201ENST00000570544 333 ntBASIC15.86■□□□□ 0.13
AP1S1P61966 AC015910.1-201ENST00000579400 975 ntBASIC15.86■□□□□ 0.13
AP1S1P61966 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
AP1S1P61966 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
AP1S1P61966 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
AP1S1P61966 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.86■□□□□ 0.13
AP1S1P61966 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.86■□□□□ 0.13
AP1S1P61966 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP1S1P61966 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
AP1S1P61966 AC127383.1-201ENST00000444697 1800 ntBASIC15.86■□□□□ 0.13
AP1S1P61966 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.86■□□□□ 0.13
AP1S1P61966 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP1S1P61966 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.86■□□□□ 0.13
AP1S1P61966 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP1S1P61966 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
AP1S1P61966 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
AP1S1P61966 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
AP1S1P61966 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
AP1S1P61966 AC007541.1-201ENST00000570282 1469 ntBASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms