Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
VBP1P61758 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VBP1P61758 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.24□□□□□ -0.13
VBP1P61758 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.24□□□□□ -0.13
VBP1P61758 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VBP1P61758 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.24□□□□□ -0.13
VBP1P61758 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VBP1P61758 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.24□□□□□ -0.13
VBP1P61758 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VBP1P61758 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.24□□□□□ -0.13
VBP1P61758 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.24□□□□□ -0.13
VBP1P61758 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.24□□□□□ -0.13
VBP1P61758 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.24□□□□□ -0.13
VBP1P61758 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC14.24□□□□□ -0.13
VBP1P61758 AP005901.3-202ENST00000581653 237 ntBASIC14.24□□□□□ -0.13
VBP1P61758 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.24□□□□□ -0.13
VBP1P61758 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.24□□□□□ -0.13
VBP1P61758 AC010331.1-201ENST00000611423 582 ntBASIC14.24□□□□□ -0.13
VBP1P61758 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.24□□□□□ -0.13
VBP1P61758 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.24□□□□□ -0.13
VBP1P61758 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
VBP1P61758 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VBP1P61758 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VBP1P61758 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
VBP1P61758 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.24□□□□□ -0.13
VBP1P61758 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VBP1P61758 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VBP1P61758 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VBP1P61758 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VBP1P61758 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VBP1P61758 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VBP1P61758 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
VBP1P61758 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
VBP1P61758 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VBP1P61758 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VBP1P61758 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VBP1P61758 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
VBP1P61758 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
VBP1P61758 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
VBP1P61758 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VBP1P61758 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.23□□□□□ -0.13
VBP1P61758 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.23□□□□□ -0.13
VBP1P61758 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
VBP1P61758 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VBP1P61758 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.23□□□□□ -0.13
VBP1P61758 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VBP1P61758 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.23□□□□□ -0.13
VBP1P61758 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VBP1P61758 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14.23□□□□□ -0.13
VBP1P61758 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.23□□□□□ -0.13
VBP1P61758 VENTXP7-201ENST00000475503 772 ntBASIC14.23□□□□□ -0.13
VBP1P61758 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.23□□□□□ -0.13
VBP1P61758 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VBP1P61758 AC008550.1-201ENST00000511500 884 ntBASIC14.23□□□□□ -0.13
VBP1P61758 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.23□□□□□ -0.13
VBP1P61758 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
VBP1P61758 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.23□□□□□ -0.13
VBP1P61758 AC010203.1-204ENST00000548782 407 ntBASIC14.23□□□□□ -0.13
VBP1P61758 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.23□□□□□ -0.13
VBP1P61758 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.23□□□□□ -0.13
VBP1P61758 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.23□□□□□ -0.13
VBP1P61758 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.23□□□□□ -0.13
VBP1P61758 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
VBP1P61758 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VBP1P61758 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.23□□□□□ -0.13
VBP1P61758 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VBP1P61758 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.23□□□□□ -0.13
VBP1P61758 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VBP1P61758 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VBP1P61758 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VBP1P61758 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
VBP1P61758 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.23□□□□□ -0.13
VBP1P61758 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.23□□□□□ -0.13
VBP1P61758 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VBP1P61758 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VBP1P61758 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VBP1P61758 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
VBP1P61758 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VBP1P61758 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VBP1P61758 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VBP1P61758 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.23□□□□□ -0.13
VBP1P61758 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VBP1P61758 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.23□□□□□ -0.13
VBP1P61758 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
VBP1P61758 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
VBP1P61758 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
VBP1P61758 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.23□□□□□ -0.13
VBP1P61758 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VBP1P61758 AC079776.2-201ENST00000641154 1609 ntBASIC14.23□□□□□ -0.13
VBP1P61758 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VBP1P61758 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.22□□□□□ -0.13
VBP1P61758 AC127383.1-201ENST00000444697 1800 ntBASIC14.22□□□□□ -0.13
VBP1P61758 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VBP1P61758 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
VBP1P61758 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.22□□□□□ -0.13
VBP1P61758 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
VBP1P61758 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.22□□□□□ -0.13
VBP1P61758 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VBP1P61758 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
VBP1P61758 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms