Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
GFRA1P56159 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GFRA1P56159 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
GFRA1P56159 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GFRA1P56159 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.11□□□□□ -0.15
GFRA1P56159 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.11□□□□□ -0.15
GFRA1P56159 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.1□□□□□ -0.15
GFRA1P56159 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
GFRA1P56159 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
GFRA1P56159 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
GFRA1P56159 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFRA1P56159 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GFRA1P56159 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFRA1P56159 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
GFRA1P56159 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
GFRA1P56159 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFRA1P56159 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFRA1P56159 AP005117.1-202ENST00000581724 1908 ntBASIC14.1□□□□□ -0.15
GFRA1P56159 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFRA1P56159 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.1□□□□□ -0.15
GFRA1P56159 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFRA1P56159 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
GFRA1P56159 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFRA1P56159 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GFRA1P56159 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
GFRA1P56159 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.1□□□□□ -0.15
GFRA1P56159 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
GFRA1P56159 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.1□□□□□ -0.15
GFRA1P56159 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.1□□□□□ -0.15
GFRA1P56159 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.1□□□□□ -0.15
GFRA1P56159 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.1□□□□□ -0.15
GFRA1P56159 AC011495.1-201ENST00000498085 584 ntBASIC14.1□□□□□ -0.15
GFRA1P56159 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.1□□□□□ -0.15
GFRA1P56159 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.1□□□□□ -0.15
GFRA1P56159 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.1□□□□□ -0.15
GFRA1P56159 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.1□□□□□ -0.15
GFRA1P56159 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.1□□□□□ -0.15
GFRA1P56159 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.1□□□□□ -0.15
GFRA1P56159 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFRA1P56159 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.1□□□□□ -0.15
GFRA1P56159 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.1□□□□□ -0.15
GFRA1P56159 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
GFRA1P56159 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFRA1P56159 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GFRA1P56159 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.1□□□□□ -0.15
GFRA1P56159 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.1□□□□□ -0.15
GFRA1P56159 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.1□□□□□ -0.15
GFRA1P56159 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
GFRA1P56159 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFRA1P56159 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GFRA1P56159 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
GFRA1P56159 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.1□□□□□ -0.15
GFRA1P56159 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GFRA1P56159 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFRA1P56159 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GFRA1P56159 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFRA1P56159 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
GFRA1P56159 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.1□□□□□ -0.15
GFRA1P56159 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GFRA1P56159 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GFRA1P56159 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFRA1P56159 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GFRA1P56159 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GFRA1P56159 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GFRA1P56159 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GFRA1P56159 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.09□□□□□ -0.15
GFRA1P56159 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.09□□□□□ -0.15
GFRA1P56159 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GFRA1P56159 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
GFRA1P56159 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GFRA1P56159 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
GFRA1P56159 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
GFRA1P56159 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
GFRA1P56159 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GFRA1P56159 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
GFRA1P56159 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
GFRA1P56159 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.09□□□□□ -0.15
GFRA1P56159 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GFRA1P56159 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GFRA1P56159 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GFRA1P56159 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
GFRA1P56159 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GFRA1P56159 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
GFRA1P56159 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.09□□□□□ -0.15
GFRA1P56159 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.09□□□□□ -0.15
GFRA1P56159 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.09□□□□□ -0.15
GFRA1P56159 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.09□□□□□ -0.15
GFRA1P56159 INE1-201ENST00000456273 945 ntBASIC14.09□□□□□ -0.15
GFRA1P56159 RPL13AP25-201ENST00000484130 612 ntBASIC14.09□□□□□ -0.15
GFRA1P56159 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.09□□□□□ -0.15
GFRA1P56159 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
GFRA1P56159 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.09□□□□□ -0.15
GFRA1P56159 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
GFRA1P56159 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
GFRA1P56159 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
GFRA1P56159 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
GFRA1P56159 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.09□□□□□ -0.15
GFRA1P56159 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.09□□□□□ -0.15
GFRA1P56159 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.09□□□□□ -0.15
GFRA1P56159 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms