Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
GFERP55789 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
GFERP55789 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
GFERP55789 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.04■□□□□ -0
GFERP55789 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.04■□□□□ -0
GFERP55789 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.03■□□□□ -0
GFERP55789 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
GFERP55789 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GFERP55789 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GFERP55789 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.03■□□□□ -0
GFERP55789 AC099398.1-201ENST00000567919 2776 ntBASIC15.03■□□□□ -0
GFERP55789 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.03■□□□□ -0
GFERP55789 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.03■□□□□ -0
GFERP55789 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.03■□□□□ -0
GFERP55789 AL118508.1-201ENST00000613502 2345 ntBASIC15.03■□□□□ -0
GFERP55789 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
GFERP55789 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
GFERP55789 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
GFERP55789 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GFERP55789 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.03■□□□□ -0
GFERP55789 ACTG1P3-201ENST00000431775 1114 ntBASIC15.03■□□□□ -0
GFERP55789 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.03■□□□□ -0
GFERP55789 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.03■□□□□ -0
GFERP55789 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.03■□□□□ -0
GFERP55789 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
GFERP55789 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
GFERP55789 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
GFERP55789 SLC25A47P1-201ENST00000531577 414 ntBASIC15.03■□□□□ -0
GFERP55789 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.03■□□□□ -0
GFERP55789 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.03■□□□□ -0
GFERP55789 AL603832.2-201ENST00000566195 2125 ntBASIC15.03■□□□□ -0
GFERP55789 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.03■□□□□ -0
GFERP55789 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.03■□□□□ -0
GFERP55789 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.03■□□□□ -0
GFERP55789 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
GFERP55789 AC233724.13-201ENST00000598383 410 ntBASIC15.03■□□□□ -0
GFERP55789 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.03■□□□□ -0
GFERP55789 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.03■□□□□ -0
GFERP55789 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GFERP55789 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.03■□□□□ -0
GFERP55789 AC112504.1-201ENST00000623415 1841 ntBASIC15.03■□□□□ -0
GFERP55789 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.03■□□□□ -0
GFERP55789 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GFERP55789 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
GFERP55789 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.02■□□□□ -0
GFERP55789 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.02■□□□□ -0
GFERP55789 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GFERP55789 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.02■□□□□ -0
GFERP55789 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.02■□□□□ -0
GFERP55789 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
GFERP55789 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GFERP55789 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.02■□□□□ -0
GFERP55789 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.02■□□□□ -0
GFERP55789 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
GFERP55789 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GFERP55789 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.02■□□□□ -0
GFERP55789 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.02■□□□□ -0
GFERP55789 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
GFERP55789 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.02■□□□□ -0
GFERP55789 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.02■□□□□ -0
GFERP55789 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.02■□□□□ -0
GFERP55789 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.02■□□□□ -0
GFERP55789 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.02■□□□□ -0
GFERP55789 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.02■□□□□ -0
GFERP55789 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.02■□□□□ -0
GFERP55789 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GFERP55789 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.02■□□□□ -0
GFERP55789 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.02■□□□□ -0
GFERP55789 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
GFERP55789 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
GFERP55789 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GFERP55789 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.02■□□□□ -0
GFERP55789 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.02■□□□□ -0
GFERP55789 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
GFERP55789 AC119751.2-201ENST00000504529 210 ntBASIC15.02■□□□□ -0
GFERP55789 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
GFERP55789 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.02■□□□□ -0
GFERP55789 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.02■□□□□ -0
GFERP55789 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.02■□□□□ -0
GFERP55789 AC015910.1-201ENST00000579400 975 ntBASIC15.02■□□□□ -0
GFERP55789 CLUHP6-201ENST00000580789 941 ntBASIC15.02■□□□□ -0
GFERP55789 MIR4259-201ENST00000584466 101 ntBASIC15.02■□□□□ -0
GFERP55789 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.02■□□□□ -0
GFERP55789 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.02■□□□□ -0
GFERP55789 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GFERP55789 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GFERP55789 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.02□□□□□ -0.01
GFERP55789 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GFERP55789 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GFERP55789 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
GFERP55789 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.02□□□□□ -0.01
GFERP55789 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GFERP55789 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
GFERP55789 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
GFERP55789 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
GFERP55789 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
GFERP55789 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.02□□□□□ -0.01
GFERP55789 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
GFERP55789 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GFERP55789 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms