Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.52■□□□□ 0.07
CDH13P55290 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH13P55290 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDH13P55290 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH13P55290 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CDH13P55290 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH13P55290 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH13P55290 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH13P55290 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH13P55290 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH13P55290 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH13P55290 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH13P55290 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH13P55290 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH13P55290 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH13P55290 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CDH13P55290 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CDH13P55290 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH13P55290 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH13P55290 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH13P55290 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH13P55290 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.51■□□□□ 0.07
CDH13P55290 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH13P55290 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CDH13P55290 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH13P55290 AC026396.1-201ENST00000419388 421 ntBASIC15.51■□□□□ 0.07
CDH13P55290 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH13P55290 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH13P55290 IGHV3-62-201ENST00000520057 340 ntBASIC15.51■□□□□ 0.07
CDH13P55290 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
CDH13P55290 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH13P55290 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH13P55290 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH13P55290 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH13P55290 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH13P55290 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH13P55290 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH13P55290 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CDH13P55290 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH13P55290 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH13P55290 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH13P55290 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH13P55290 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH13P55290 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH13P55290 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH13P55290 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH13P55290 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH13P55290 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
CDH13P55290 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH13P55290 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH13P55290 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH13P55290 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH13P55290 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH13P55290 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH13P55290 TCAF2P1-201ENST00000291129 2421 ntBASIC15.51■□□□□ 0.07
CDH13P55290 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH13P55290 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.5■□□□□ 0.07
CDH13P55290 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH13P55290 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CDH13P55290 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH13P55290 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CDH13P55290 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.5■□□□□ 0.07
CDH13P55290 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH13P55290 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CDH13P55290 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH13P55290 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH13P55290 HLA-H-201ENST00000383620 1096 ntBASIC15.5■□□□□ 0.07
CDH13P55290 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH13P55290 YBX2P1-201ENST00000394192 760 ntBASIC15.5■□□□□ 0.07
CDH13P55290 MCCD1P2-201ENST00000423228 335 ntBASIC15.5■□□□□ 0.07
CDH13P55290 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH13P55290 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH13P55290 AC040169.1-201ENST00000565382 521 ntBASIC15.5■□□□□ 0.07
CDH13P55290 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH13P55290 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH13P55290 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH13P55290 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH13P55290 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH13P55290 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH13P55290 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH13P55290 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH13P55290 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH13P55290 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH13P55290 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH13P55290 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH13P55290 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CDH13P55290 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH13P55290 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH13P55290 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CDH13P55290 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH13P55290 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH13P55290 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CDH13P55290 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH13P55290 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDH13P55290 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
CDH13P55290 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH13P55290 AP3S2-216ENST00000617003 1561 ntBASIC15.49■□□□□ 0.07
CDH13P55290 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDH13P55290 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.49■□□□□ 0.07
CDH13P55290 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms