Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.26■□□□□ 0.67
PDE1AP54750 GPALPP1-207ENST00000611650 899 ntBASIC19.26■□□□□ 0.67
PDE1AP54750 AL109936.8-201ENST00000641772 604 ntBASIC19.26■□□□□ 0.67
PDE1AP54750 KRT8P44-201ENST00000441609 1350 ntBASIC19.26■□□□□ 0.67
PDE1AP54750 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDE1AP54750 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDE1AP54750 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC19.26■□□□□ 0.67
PDE1AP54750 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PDE1AP54750 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC19.26■□□□□ 0.67
PDE1AP54750 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC19.26■□□□□ 0.67
PDE1AP54750 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE1AP54750 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC19.25■□□□□ 0.67
PDE1AP54750 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.25■□□□□ 0.67
PDE1AP54750 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE1AP54750 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE1AP54750 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE1AP54750 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE1AP54750 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19.25■□□□□ 0.67
PDE1AP54750 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE1AP54750 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE1AP54750 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDE1AP54750 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC19.25■□□□□ 0.67
PDE1AP54750 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE1AP54750 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC19.25■□□□□ 0.67
PDE1AP54750 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
PDE1AP54750 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC19.25■□□□□ 0.67
PDE1AP54750 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.25■□□□□ 0.67
PDE1AP54750 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE1AP54750 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE1AP54750 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE1AP54750 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDE1AP54750 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDE1AP54750 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.25■□□□□ 0.67
PDE1AP54750 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.25■□□□□ 0.67
PDE1AP54750 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.25■□□□□ 0.67
PDE1AP54750 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE1AP54750 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.25■□□□□ 0.67
PDE1AP54750 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.25■□□□□ 0.67
PDE1AP54750 AC044860.1-202ENST00000559481 777 ntBASIC19.25■□□□□ 0.67
PDE1AP54750 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PDE1AP54750 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PDE1AP54750 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.25■□□□□ 0.67
PDE1AP54750 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE1AP54750 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDE1AP54750 CELP-203ENST00000624767 2414 ntTSL 5 BASIC19.25■□□□□ 0.67
PDE1AP54750 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PDE1AP54750 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE1AP54750 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PDE1AP54750 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE1AP54750 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE1AP54750 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PDE1AP54750 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDE1AP54750 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PDE1AP54750 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE1AP54750 AL596257.1-201ENST00000641463 2694 ntBASIC19.25■□□□□ 0.67
PDE1AP54750 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE1AP54750 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PDE1AP54750 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19.25■□□□□ 0.67
PDE1AP54750 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE1AP54750 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PDE1AP54750 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE1AP54750 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE1AP54750 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE1AP54750 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC19.24■□□□□ 0.67
PDE1AP54750 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE1AP54750 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC19.24■□□□□ 0.67
PDE1AP54750 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC19.24■□□□□ 0.67
PDE1AP54750 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE1AP54750 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PDE1AP54750 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE1AP54750 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC19.24■□□□□ 0.67
PDE1AP54750 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
PDE1AP54750 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE1AP54750 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE1AP54750 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC19.24■□□□□ 0.67
PDE1AP54750 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.24■□□□□ 0.67
PDE1AP54750 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PDE1AP54750 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDE1AP54750 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE1AP54750 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE1AP54750 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.24■□□□□ 0.67
PDE1AP54750 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.24■□□□□ 0.67
PDE1AP54750 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.24■□□□□ 0.67
PDE1AP54750 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.24■□□□□ 0.67
PDE1AP54750 ZNF890P-202ENST00000530367 1156 ntBASIC19.24■□□□□ 0.67
PDE1AP54750 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDE1AP54750 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC19.24■□□□□ 0.67
PDE1AP54750 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.24■□□□□ 0.67
PDE1AP54750 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
PDE1AP54750 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.24■□□□□ 0.67
PDE1AP54750 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE1AP54750 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE1AP54750 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
PDE1AP54750 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE1AP54750 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC19.24■□□□□ 0.67
PDE1AP54750 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PDE1AP54750 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE1AP54750 DEK-201ENST00000244776 1441 ntTSL 2 BASIC19.24■□□□□ 0.67
PDE1AP54750 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE1AP54750 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms