Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PSEN1P49768 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PSEN1P49768 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PSEN1P49768 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PSEN1P49768 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.96■□□□□ 0.31
PSEN1P49768 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PSEN1P49768 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.96■□□□□ 0.31
PSEN1P49768 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.96■□□□□ 0.31
PSEN1P49768 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PSEN1P49768 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PSEN1P49768 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PSEN1P49768 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PSEN1P49768 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PSEN1P49768 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PSEN1P49768 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PSEN1P49768 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.96■□□□□ 0.31
PSEN1P49768 MTATP6P17-201ENST00000431030 672 ntBASIC16.96■□□□□ 0.31
PSEN1P49768 AC241585.1-201ENST00000433527 519 ntBASIC16.96■□□□□ 0.31
PSEN1P49768 MTND6P24-201ENST00000440466 518 ntBASIC16.96■□□□□ 0.31
PSEN1P49768 AC027369.6-201ENST00000525520 931 ntBASIC16.96■□□□□ 0.31
PSEN1P49768 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.96■□□□□ 0.31
PSEN1P49768 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.96■□□□□ 0.31
PSEN1P49768 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.96■□□□□ 0.31
PSEN1P49768 AL096865.1-201ENST00000606796 927 ntBASIC16.96■□□□□ 0.31
PSEN1P49768 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC16.96■□□□□ 0.31
PSEN1P49768 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PSEN1P49768 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PSEN1P49768 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.96■□□□□ 0.31
PSEN1P49768 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PSEN1P49768 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.96■□□□□ 0.31
PSEN1P49768 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PSEN1P49768 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PSEN1P49768 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PSEN1P49768 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PSEN1P49768 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PSEN1P49768 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.96■□□□□ 0.31
PSEN1P49768 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
PSEN1P49768 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.96■□□□□ 0.3
PSEN1P49768 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PSEN1P49768 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PSEN1P49768 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
PSEN1P49768 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PSEN1P49768 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.95■□□□□ 0.3
PSEN1P49768 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PSEN1P49768 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PSEN1P49768 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.95■□□□□ 0.3
PSEN1P49768 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PSEN1P49768 AC006449.5-201ENST00000610658 2098 ntBASIC16.95■□□□□ 0.3
PSEN1P49768 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PSEN1P49768 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PSEN1P49768 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PSEN1P49768 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PSEN1P49768 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.95■□□□□ 0.3
PSEN1P49768 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.95■□□□□ 0.3
PSEN1P49768 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PSEN1P49768 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PSEN1P49768 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.95■□□□□ 0.3
PSEN1P49768 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.95■□□□□ 0.3
PSEN1P49768 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.95■□□□□ 0.3
PSEN1P49768 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC16.95■□□□□ 0.3
PSEN1P49768 AC092580.3-201ENST00000430932 139 ntBASIC16.95■□□□□ 0.3
PSEN1P49768 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
PSEN1P49768 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.95■□□□□ 0.3
PSEN1P49768 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PSEN1P49768 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.95■□□□□ 0.3
PSEN1P49768 AC083964.1-201ENST00000607549 630 ntBASIC16.95■□□□□ 0.3
PSEN1P49768 AL589739.1-201ENST00000607720 493 ntBASIC16.95■□□□□ 0.3
PSEN1P49768 AL133215.2-201ENST00000609242 977 ntBASIC16.95■□□□□ 0.3
PSEN1P49768 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PSEN1P49768 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PSEN1P49768 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PSEN1P49768 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PSEN1P49768 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.95■□□□□ 0.3
PSEN1P49768 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.95■□□□□ 0.3
PSEN1P49768 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PSEN1P49768 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PSEN1P49768 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PSEN1P49768 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PSEN1P49768 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PSEN1P49768 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PSEN1P49768 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PSEN1P49768 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PSEN1P49768 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
PSEN1P49768 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PSEN1P49768 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PSEN1P49768 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PSEN1P49768 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PSEN1P49768 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PSEN1P49768 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PSEN1P49768 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PSEN1P49768 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PSEN1P49768 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PSEN1P49768 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PSEN1P49768 ALOX12P2-203ENST00000570921 1945 ntBASIC16.94■□□□□ 0.3
PSEN1P49768 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PSEN1P49768 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PSEN1P49768 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PSEN1P49768 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PSEN1P49768 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.94■□□□□ 0.3
PSEN1P49768 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms