Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CSNK1A1P48729 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSNK1A1P48729 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.11□□□□□ -0.15
CSNK1A1P48729 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSNK1A1P48729 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSNK1A1P48729 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CSNK1A1P48729 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
CSNK1A1P48729 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CSNK1A1P48729 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CSNK1A1P48729 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.11□□□□□ -0.15
CSNK1A1P48729 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CSNK1A1P48729 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSNK1A1P48729 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSNK1A1P48729 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSNK1A1P48729 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSNK1A1P48729 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CSNK1A1P48729 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.11□□□□□ -0.15
CSNK1A1P48729 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.11□□□□□ -0.15
CSNK1A1P48729 AZGP1P1-201ENST00000411909 902 ntBASIC14.11□□□□□ -0.15
CSNK1A1P48729 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CSNK1A1P48729 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSNK1A1P48729 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
CSNK1A1P48729 FAM86GP-201ENST00000448322 971 ntBASIC14.11□□□□□ -0.15
CSNK1A1P48729 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.11□□□□□ -0.15
CSNK1A1P48729 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CSNK1A1P48729 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.11□□□□□ -0.15
CSNK1A1P48729 AC067863.1-201ENST00000494933 530 ntBASIC14.11□□□□□ -0.15
CSNK1A1P48729 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.11□□□□□ -0.15
CSNK1A1P48729 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.11□□□□□ -0.15
CSNK1A1P48729 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CSNK1A1P48729 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSNK1A1P48729 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSNK1A1P48729 AL079307.3-201ENST00000556114 283 ntBASIC14.11□□□□□ -0.15
CSNK1A1P48729 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.11□□□□□ -0.15
CSNK1A1P48729 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CSNK1A1P48729 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.11□□□□□ -0.15
CSNK1A1P48729 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.11□□□□□ -0.15
CSNK1A1P48729 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CSNK1A1P48729 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.11□□□□□ -0.15
CSNK1A1P48729 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.11□□□□□ -0.15
CSNK1A1P48729 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CSNK1A1P48729 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CSNK1A1P48729 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.11□□□□□ -0.15
CSNK1A1P48729 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSNK1A1P48729 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.11□□□□□ -0.15
CSNK1A1P48729 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CSNK1A1P48729 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSNK1A1P48729 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CSNK1A1P48729 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.11□□□□□ -0.15
CSNK1A1P48729 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CSNK1A1P48729 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CSNK1A1P48729 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.11□□□□□ -0.15
CSNK1A1P48729 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CSNK1A1P48729 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.1□□□□□ -0.15
CSNK1A1P48729 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK1A1P48729 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK1A1P48729 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK1A1P48729 KRT8P12-202ENST00000472924 1397 ntBASIC14.1□□□□□ -0.15
CSNK1A1P48729 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.1□□□□□ -0.15
CSNK1A1P48729 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK1A1P48729 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.1□□□□□ -0.15
CSNK1A1P48729 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK1A1P48729 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK1A1P48729 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.1□□□□□ -0.15
CSNK1A1P48729 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK1A1P48729 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK1A1P48729 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK1A1P48729 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK1A1P48729 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CSNK1A1P48729 FO393414.2-201ENST00000405153 598 ntBASIC14.1□□□□□ -0.15
CSNK1A1P48729 METTL21AP1-201ENST00000438852 635 ntBASIC14.1□□□□□ -0.15
CSNK1A1P48729 SERBP1P3-201ENST00000459980 809 ntBASIC14.1□□□□□ -0.15
CSNK1A1P48729 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.1□□□□□ -0.15
CSNK1A1P48729 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK1A1P48729 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.1□□□□□ -0.15
CSNK1A1P48729 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.1□□□□□ -0.15
CSNK1A1P48729 AC006538.3-201ENST00000612495 578 ntBASIC14.1□□□□□ -0.15
CSNK1A1P48729 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.1□□□□□ -0.15
CSNK1A1P48729 AC093028.1-201ENST00000622998 982 ntBASIC14.1□□□□□ -0.15
CSNK1A1P48729 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.1□□□□□ -0.15
CSNK1A1P48729 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
CSNK1A1P48729 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.1□□□□□ -0.15
CSNK1A1P48729 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK1A1P48729 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK1A1P48729 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.1□□□□□ -0.15
CSNK1A1P48729 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.1□□□□□ -0.15
CSNK1A1P48729 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK1A1P48729 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CSNK1A1P48729 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.1□□□□□ -0.15
CSNK1A1P48729 KRT18P28-201ENST00000453838 1332 ntBASIC14.1□□□□□ -0.15
CSNK1A1P48729 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK1A1P48729 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK1A1P48729 CICP13-201ENST00000422015 2789 ntBASIC14.1□□□□□ -0.15
CSNK1A1P48729 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
CSNK1A1P48729 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK1A1P48729 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.1□□□□□ -0.15
CSNK1A1P48729 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.1□□□□□ -0.15
CSNK1A1P48729 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CSNK1A1P48729 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CSNK1A1P48729 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms