Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ATRXP46100 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATRXP46100 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATRXP46100 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATRXP46100 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATRXP46100 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATRXP46100 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATRXP46100 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATRXP46100 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATRXP46100 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.26□□□□□ -0.13
ATRXP46100 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ATRXP46100 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATRXP46100 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATRXP46100 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATRXP46100 RPL14-203ENST00000416518 812 ntTSL 3 BASIC14.26□□□□□ -0.13
ATRXP46100 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC14.26□□□□□ -0.13
ATRXP46100 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC14.26□□□□□ -0.13
ATRXP46100 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATRXP46100 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.26□□□□□ -0.13
ATRXP46100 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.26□□□□□ -0.13
ATRXP46100 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.26□□□□□ -0.13
ATRXP46100 AL627230.2-201ENST00000613254 655 ntBASIC14.26□□□□□ -0.13
ATRXP46100 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.26□□□□□ -0.13
ATRXP46100 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ATRXP46100 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATRXP46100 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATRXP46100 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATRXP46100 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.26□□□□□ -0.13
ATRXP46100 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
ATRXP46100 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.26□□□□□ -0.13
ATRXP46100 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATRXP46100 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.26□□□□□ -0.13
ATRXP46100 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ATRXP46100 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATRXP46100 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.26□□□□□ -0.13
ATRXP46100 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ATRXP46100 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
ATRXP46100 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
ATRXP46100 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATRXP46100 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ATRXP46100 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ATRXP46100 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATRXP46100 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ATRXP46100 AC136604.1-201ENST00000418535 575 ntBASIC14.25□□□□□ -0.13
ATRXP46100 KRT18P43-201ENST00000469825 1281 ntBASIC14.25□□□□□ -0.13
ATRXP46100 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC14.25□□□□□ -0.13
ATRXP46100 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.25□□□□□ -0.13
ATRXP46100 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.25□□□□□ -0.13
ATRXP46100 PRSS30P-206ENST00000641773 873 ntBASIC14.25□□□□□ -0.13
ATRXP46100 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATRXP46100 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATRXP46100 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ATRXP46100 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATRXP46100 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.25□□□□□ -0.13
ATRXP46100 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATRXP46100 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATRXP46100 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ATRXP46100 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATRXP46100 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ATRXP46100 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ATRXP46100 CNN2P10-201ENST00000443067 918 ntBASIC14.25□□□□□ -0.13
ATRXP46100 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ATRXP46100 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC14.25□□□□□ -0.13
ATRXP46100 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATRXP46100 AC007881.3-201ENST00000608897 607 ntBASIC14.25□□□□□ -0.13
ATRXP46100 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATRXP46100 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATRXP46100 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.25□□□□□ -0.13
ATRXP46100 AL391256.1-201ENST00000443260 1855 ntBASIC14.25□□□□□ -0.13
ATRXP46100 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATRXP46100 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ATRXP46100 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATRXP46100 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ATRXP46100 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ATRXP46100 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
ATRXP46100 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATRXP46100 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATRXP46100 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATRXP46100 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATRXP46100 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ATRXP46100 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATRXP46100 AC023141.7-201ENST00000430646 407 ntBASIC14.24□□□□□ -0.13
ATRXP46100 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.24□□□□□ -0.13
ATRXP46100 AC245100.5-201ENST00000452108 331 ntBASIC14.24□□□□□ -0.13
ATRXP46100 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATRXP46100 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.24□□□□□ -0.13
ATRXP46100 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.24□□□□□ -0.13
ATRXP46100 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
ATRXP46100 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.24□□□□□ -0.13
ATRXP46100 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.24□□□□□ -0.13
ATRXP46100 AC105137.3-201ENST00000617588 984 ntBASIC14.24□□□□□ -0.13
ATRXP46100 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATRXP46100 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ATRXP46100 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ATRXP46100 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.24□□□□□ -0.13
ATRXP46100 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.24□□□□□ -0.13
ATRXP46100 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
ATRXP46100 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATRXP46100 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATRXP46100 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms