Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
KRT9P35527 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KRT9P35527 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.35■□□□□ 0.37
KRT9P35527 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
KRT9P35527 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
KRT9P35527 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT9P35527 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
KRT9P35527 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT9P35527 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT9P35527 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KRT9P35527 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT9P35527 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.35■□□□□ 0.37
KRT9P35527 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.35■□□□□ 0.37
KRT9P35527 MKNK2P1-201ENST00000437526 628 ntBASIC17.35■□□□□ 0.37
KRT9P35527 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
KRT9P35527 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.35■□□□□ 0.37
KRT9P35527 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
KRT9P35527 AC027307.2-201ENST00000591252 911 ntBASIC17.35■□□□□ 0.37
KRT9P35527 AC026120.1-201ENST00000611536 926 ntBASIC17.35■□□□□ 0.37
KRT9P35527 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
KRT9P35527 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KRT9P35527 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.35■□□□□ 0.37
KRT9P35527 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
KRT9P35527 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT9P35527 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT9P35527 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.35■□□□□ 0.37
KRT9P35527 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT9P35527 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KRT9P35527 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
KRT9P35527 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
KRT9P35527 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.35■□□□□ 0.37
KRT9P35527 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KRT9P35527 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.34■□□□□ 0.37
KRT9P35527 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
KRT9P35527 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KRT9P35527 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KRT9P35527 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KRT9P35527 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KRT9P35527 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KRT9P35527 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KRT9P35527 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
KRT9P35527 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
KRT9P35527 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
KRT9P35527 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
KRT9P35527 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
KRT9P35527 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KRT9P35527 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KRT9P35527 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.34■□□□□ 0.37
KRT9P35527 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.34■□□□□ 0.37
KRT9P35527 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
KRT9P35527 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KRT9P35527 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.34■□□□□ 0.37
KRT9P35527 DNAJB3-201ENST00000446806 729 ntBASIC17.34■□□□□ 0.37
KRT9P35527 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KRT9P35527 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.34■□□□□ 0.37
KRT9P35527 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.34■□□□□ 0.37
KRT9P35527 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.34■□□□□ 0.37
KRT9P35527 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KRT9P35527 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.34■□□□□ 0.37
KRT9P35527 AC105233.2-201ENST00000523697 349 ntBASIC17.34■□□□□ 0.37
KRT9P35527 AF228730.5-201ENST00000530288 346 ntBASIC17.34■□□□□ 0.37
KRT9P35527 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.34■□□□□ 0.37
KRT9P35527 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.34■□□□□ 0.37
KRT9P35527 BNIP3P1-202ENST00000550043 1585 ntBASIC17.34■□□□□ 0.37
KRT9P35527 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
KRT9P35527 AC073389.1-201ENST00000595595 795 ntBASIC17.34■□□□□ 0.37
KRT9P35527 AL691432.1-201ENST00000596308 1422 ntBASIC17.34■□□□□ 0.37
KRT9P35527 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.34■□□□□ 0.37
KRT9P35527 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.34■□□□□ 0.37
KRT9P35527 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
KRT9P35527 AC008267.7-201ENST00000624570 1194 ntBASIC17.34■□□□□ 0.37
KRT9P35527 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
KRT9P35527 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
KRT9P35527 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
KRT9P35527 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
KRT9P35527 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KRT9P35527 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
KRT9P35527 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.34■□□□□ 0.37
KRT9P35527 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
KRT9P35527 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
KRT9P35527 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.33■□□□□ 0.37
KRT9P35527 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.33■□□□□ 0.37
KRT9P35527 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.33■□□□□ 0.37
KRT9P35527 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
KRT9P35527 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
KRT9P35527 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
KRT9P35527 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
KRT9P35527 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
KRT9P35527 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
KRT9P35527 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
KRT9P35527 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
KRT9P35527 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
KRT9P35527 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
KRT9P35527 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
KRT9P35527 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
KRT9P35527 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
KRT9P35527 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
KRT9P35527 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.33■□□□□ 0.37
KRT9P35527 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
KRT9P35527 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms