Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC004066.1-201ENST00000502488 802 ntBASIC16.98■□□□□ 0.31
HOXC8P31273 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.98■□□□□ 0.31
HOXC8P31273 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.98■□□□□ 0.31
HOXC8P31273 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.98■□□□□ 0.31
HOXC8P31273 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.98■□□□□ 0.31
HOXC8P31273 ENPP7P14-201ENST00000621765 1040 ntBASIC16.98■□□□□ 0.31
HOXC8P31273 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.98■□□□□ 0.31
HOXC8P31273 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
HOXC8P31273 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
HOXC8P31273 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.98■□□□□ 0.31
HOXC8P31273 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HOXC8P31273 AL158070.2-201ENST00000623713 1621 ntBASIC16.98■□□□□ 0.31
HOXC8P31273 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HOXC8P31273 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HOXC8P31273 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HOXC8P31273 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.98■□□□□ 0.31
HOXC8P31273 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HOXC8P31273 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
HOXC8P31273 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HOXC8P31273 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HOXC8P31273 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HOXC8P31273 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
HOXC8P31273 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
HOXC8P31273 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC8P31273 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC8P31273 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
HOXC8P31273 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
HOXC8P31273 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC8P31273 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
HOXC8P31273 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC8P31273 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC8P31273 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC8P31273 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
HOXC8P31273 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.97■□□□□ 0.31
HOXC8P31273 EIF3FP3-201ENST00000434851 1086 ntBASIC16.97■□□□□ 0.31
HOXC8P31273 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.97■□□□□ 0.31
HOXC8P31273 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.97■□□□□ 0.31
HOXC8P31273 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.97■□□□□ 0.31
HOXC8P31273 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.97■□□□□ 0.31
HOXC8P31273 AP006547.1-201ENST00000563435 692 ntBASIC16.97■□□□□ 0.31
HOXC8P31273 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.97■□□□□ 0.31
HOXC8P31273 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.97■□□□□ 0.31
HOXC8P31273 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
HOXC8P31273 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.97■□□□□ 0.31
HOXC8P31273 AL022328.3-201ENST00000607943 679 ntBASIC16.97■□□□□ 0.31
HOXC8P31273 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC8P31273 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC8P31273 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
HOXC8P31273 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC8P31273 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC8P31273 CYP2T1P-202ENST00000641596 2535 ntBASIC16.97■□□□□ 0.31
HOXC8P31273 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC8P31273 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.97■□□□□ 0.31
HOXC8P31273 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HOXC8P31273 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
HOXC8P31273 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC8P31273 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC8P31273 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
HOXC8P31273 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.96■□□□□ 0.31
HOXC8P31273 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC8P31273 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.96■□□□□ 0.31
HOXC8P31273 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC8P31273 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC8P31273 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
HOXC8P31273 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC8P31273 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC8P31273 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC8P31273 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC8P31273 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
HOXC8P31273 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC8P31273 MTX1P1-201ENST00000440904 838 ntBASIC16.96■□□□□ 0.31
HOXC8P31273 AC004898.1-201ENST00000451057 766 ntBASIC16.96■□□□□ 0.31
HOXC8P31273 AC104306.2-201ENST00000451877 341 ntBASIC16.96■□□□□ 0.31
HOXC8P31273 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.96■□□□□ 0.31
HOXC8P31273 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC8P31273 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.96■□□□□ 0.31
HOXC8P31273 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
HOXC8P31273 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.96■□□□□ 0.31
HOXC8P31273 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.96■□□□□ 0.31
HOXC8P31273 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.96■□□□□ 0.31
HOXC8P31273 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC8P31273 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.96■□□□□ 0.31
HOXC8P31273 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
HOXC8P31273 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.96■□□□□ 0.31
HOXC8P31273 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.96■□□□□ 0.31
HOXC8P31273 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC8P31273 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC8P31273 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC8P31273 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC8P31273 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXC8P31273 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HOXC8P31273 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.96■□□□□ 0.3
HOXC8P31273 AC127383.1-201ENST00000444697 1800 ntBASIC16.96■□□□□ 0.3
HOXC8P31273 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
HOXC8P31273 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HOXC8P31273 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HOXC8P31273 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXC8P31273 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HOXC8P31273 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.95■□□□□ 0.3
HOXC8P31273 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms