Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.29■□□□□ 0.04
CAPN3P20807 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CAPN3P20807 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN3P20807 AGAP7P-201ENST00000582299 2062 ntBASIC15.29■□□□□ 0.04
CAPN3P20807 AGAP14-201ENST00000624701 2060 ntBASIC15.29■□□□□ 0.04
CAPN3P20807 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.29■□□□□ 0.04
CAPN3P20807 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPN3P20807 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.28■□□□□ 0.04
CAPN3P20807 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
CAPN3P20807 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.28■□□□□ 0.04
CAPN3P20807 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN3P20807 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN3P20807 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN3P20807 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN3P20807 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN3P20807 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
CAPN3P20807 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN3P20807 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN3P20807 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN3P20807 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CAPN3P20807 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN3P20807 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CAPN3P20807 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN3P20807 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN3P20807 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN3P20807 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN3P20807 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN3P20807 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.28■□□□□ 0.04
CAPN3P20807 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.28■□□□□ 0.04
CAPN3P20807 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.28■□□□□ 0.04
CAPN3P20807 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN3P20807 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN3P20807 RHOQP3-201ENST00000437982 621 ntBASIC15.28■□□□□ 0.04
CAPN3P20807 BCRP1-201ENST00000444246 691 ntBASIC15.28■□□□□ 0.04
CAPN3P20807 ACTG1P14-201ENST00000446382 1122 ntBASIC15.28■□□□□ 0.04
CAPN3P20807 PRYP6-201ENST00000514804 343 ntBASIC15.28■□□□□ 0.04
CAPN3P20807 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.28■□□□□ 0.04
CAPN3P20807 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.28■□□□□ 0.04
CAPN3P20807 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.28■□□□□ 0.04
CAPN3P20807 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.28■□□□□ 0.04
CAPN3P20807 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN3P20807 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CAPN3P20807 LINC01101-201ENST00000622953 1884 ntBASIC15.28■□□□□ 0.04
CAPN3P20807 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN3P20807 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN3P20807 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN3P20807 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN3P20807 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN3P20807 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN3P20807 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN3P20807 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPN3P20807 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.28■□□□□ 0.04
CAPN3P20807 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.28■□□□□ 0.04
CAPN3P20807 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN3P20807 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN3P20807 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CAPN3P20807 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN3P20807 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN3P20807 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN3P20807 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN3P20807 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN3P20807 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.27■□□□□ 0.04
CAPN3P20807 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN3P20807 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN3P20807 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN3P20807 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN3P20807 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN3P20807 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN3P20807 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.27■□□□□ 0.04
CAPN3P20807 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CAPN3P20807 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.27■□□□□ 0.04
CAPN3P20807 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.27■□□□□ 0.04
CAPN3P20807 AC096734.2-201ENST00000562054 433 ntBASIC15.27■□□□□ 0.04
CAPN3P20807 MIR4313-201ENST00000580760 101 ntBASIC15.27■□□□□ 0.04
CAPN3P20807 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CAPN3P20807 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.27■□□□□ 0.04
CAPN3P20807 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPN3P20807 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPN3P20807 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CAPN3P20807 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPN3P20807 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.27■□□□□ 0.03
CAPN3P20807 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
CAPN3P20807 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
CAPN3P20807 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPN3P20807 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.27■□□□□ 0.03
CAPN3P20807 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPN3P20807 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.27■□□□□ 0.03
CAPN3P20807 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CAPN3P20807 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CAPN3P20807 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.26■□□□□ 0.03
CAPN3P20807 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN3P20807 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.26■□□□□ 0.03
CAPN3P20807 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN3P20807 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN3P20807 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CAPN3P20807 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.26■□□□□ 0.03
CAPN3P20807 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN3P20807 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN3P20807 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.26■□□□□ 0.03
CAPN3P20807 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms