Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
RAB4AP20338 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
RAB4AP20338 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.21□□□□□ -0.45
RAB4AP20338 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB4AP20338 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB4AP20338 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.21□□□□□ -0.45
RAB4AP20338 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
RAB4AP20338 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
RAB4AP20338 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC12.21□□□□□ -0.45
RAB4AP20338 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB4AP20338 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB4AP20338 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB4AP20338 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB4AP20338 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC12.21□□□□□ -0.45
RAB4AP20338 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC12.21□□□□□ -0.45
RAB4AP20338 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC12.21□□□□□ -0.45
RAB4AP20338 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
RAB4AP20338 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
RAB4AP20338 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
RAB4AP20338 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC12.21□□□□□ -0.45
RAB4AP20338 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
RAB4AP20338 AC013467.2-201ENST00000605472 835 ntBASIC12.21□□□□□ -0.45
RAB4AP20338 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB4AP20338 CLN6-221ENST00000637494 765 ntTSL 5 BASIC12.21□□□□□ -0.45
RAB4AP20338 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB4AP20338 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.21□□□□□ -0.45
RAB4AP20338 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
RAB4AP20338 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB4AP20338 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB4AP20338 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
RAB4AP20338 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB4AP20338 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB4AP20338 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB4AP20338 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB4AP20338 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC12.21□□□□□ -0.46
RAB4AP20338 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB4AP20338 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB4AP20338 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.21□□□□□ -0.46
RAB4AP20338 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB4AP20338 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.21□□□□□ -0.46
RAB4AP20338 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB4AP20338 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB4AP20338 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB4AP20338 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.21□□□□□ -0.46
RAB4AP20338 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB4AP20338 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.21□□□□□ -0.46
RAB4AP20338 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB4AP20338 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC12.21□□□□□ -0.46
RAB4AP20338 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC12.2□□□□□ -0.46
RAB4AP20338 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB4AP20338 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB4AP20338 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC12.2□□□□□ -0.46
RAB4AP20338 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB4AP20338 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB4AP20338 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB4AP20338 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB4AP20338 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB4AP20338 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
RAB4AP20338 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB4AP20338 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB4AP20338 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB4AP20338 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.2□□□□□ -0.46
RAB4AP20338 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB4AP20338 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
RAB4AP20338 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
RAB4AP20338 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB4AP20338 AC006277.1-201ENST00000624348 1610 ntBASIC12.2□□□□□ -0.46
RAB4AP20338 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.2□□□□□ -0.46
RAB4AP20338 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.2□□□□□ -0.46
RAB4AP20338 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB4AP20338 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB4AP20338 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC12.2□□□□□ -0.46
RAB4AP20338 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC12.2□□□□□ -0.46
RAB4AP20338 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB4AP20338 SPDYE15P-201ENST00000424157 909 ntBASIC12.2□□□□□ -0.46
RAB4AP20338 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB4AP20338 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC12.2□□□□□ -0.46
RAB4AP20338 AC092597.1-201ENST00000487352 616 ntBASIC12.2□□□□□ -0.46
RAB4AP20338 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB4AP20338 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC12.2□□□□□ -0.46
RAB4AP20338 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC12.2□□□□□ -0.46
RAB4AP20338 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC12.2□□□□□ -0.46
RAB4AP20338 AL390719.2-201ENST00000606993 987 ntBASIC12.2□□□□□ -0.46
RAB4AP20338 AL138966.2-201ENST00000621997 464 ntBASIC12.2□□□□□ -0.46
RAB4AP20338 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB4AP20338 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB4AP20338 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB4AP20338 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB4AP20338 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
RAB4AP20338 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.2□□□□□ -0.46
RAB4AP20338 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
RAB4AP20338 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB4AP20338 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB4AP20338 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
RAB4AP20338 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB4AP20338 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
RAB4AP20338 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB4AP20338 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB4AP20338 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC12.2□□□□□ -0.46
RAB4AP20338 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms