Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.34■□□□□ 0.37
CLTAP09496 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.34■□□□□ 0.37
CLTAP09496 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLTAP09496 AC025048.3-201ENST00000590609 569 ntBASIC17.34■□□□□ 0.37
CLTAP09496 LINC02560-201ENST00000596379 459 ntBASIC17.34■□□□□ 0.37
CLTAP09496 AL365203.3-201ENST00000609742 2057 ntBASIC17.34■□□□□ 0.37
CLTAP09496 AC005702.4-201ENST00000618393 416 ntBASIC17.34■□□□□ 0.37
CLTAP09496 AC008761.3-201ENST00000624803 892 ntBASIC17.34■□□□□ 0.37
CLTAP09496 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.34■□□□□ 0.37
CLTAP09496 AC004840.1-201ENST00000636359 365 ntBASIC17.34■□□□□ 0.37
CLTAP09496 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLTAP09496 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLTAP09496 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLTAP09496 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CLTAP09496 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLTAP09496 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLTAP09496 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLTAP09496 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.33■□□□□ 0.37
CLTAP09496 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.33■□□□□ 0.37
CLTAP09496 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLTAP09496 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLTAP09496 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.33■□□□□ 0.37
CLTAP09496 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLTAP09496 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.33■□□□□ 0.37
CLTAP09496 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLTAP09496 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLTAP09496 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLTAP09496 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLTAP09496 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
CLTAP09496 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLTAP09496 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLTAP09496 SERBP1P5-201ENST00000510079 1181 ntBASIC17.33■□□□□ 0.36
CLTAP09496 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLTAP09496 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLTAP09496 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.33■□□□□ 0.36
CLTAP09496 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.33■□□□□ 0.36
CLTAP09496 AL109936.8-201ENST00000641772 604 ntBASIC17.33■□□□□ 0.36
CLTAP09496 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLTAP09496 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLTAP09496 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLTAP09496 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLTAP09496 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CLTAP09496 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLTAP09496 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CLTAP09496 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.33■□□□□ 0.36
CLTAP09496 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.33■□□□□ 0.36
CLTAP09496 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLTAP09496 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.33■□□□□ 0.36
CLTAP09496 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLTAP09496 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLTAP09496 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CLTAP09496 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLTAP09496 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLTAP09496 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CLTAP09496 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CLTAP09496 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CLTAP09496 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.32■□□□□ 0.36
CLTAP09496 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLTAP09496 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLTAP09496 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLTAP09496 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CLTAP09496 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLTAP09496 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.32■□□□□ 0.36
CLTAP09496 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CLTAP09496 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLTAP09496 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.32■□□□□ 0.36
CLTAP09496 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLTAP09496 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.32■□□□□ 0.36
CLTAP09496 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.32■□□□□ 0.36
CLTAP09496 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLTAP09496 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLTAP09496 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.32■□□□□ 0.36
CLTAP09496 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.32■□□□□ 0.36
CLTAP09496 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.32■□□□□ 0.36
CLTAP09496 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.32■□□□□ 0.36
CLTAP09496 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.32■□□□□ 0.36
CLTAP09496 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.32■□□□□ 0.36
CLTAP09496 TERF1P3-201ENST00000505638 1227 ntBASIC17.32■□□□□ 0.36
CLTAP09496 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.32■□□□□ 0.36
CLTAP09496 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLTAP09496 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.32■□□□□ 0.36
CLTAP09496 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLTAP09496 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.32■□□□□ 0.36
CLTAP09496 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLTAP09496 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLTAP09496 AL450472.2-201ENST00000603663 1156 ntBASIC17.32■□□□□ 0.36
CLTAP09496 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLTAP09496 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLTAP09496 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.32■□□□□ 0.36
CLTAP09496 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLTAP09496 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLTAP09496 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
CLTAP09496 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLTAP09496 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CLTAP09496 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.32■□□□□ 0.36
CLTAP09496 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.32■□□□□ 0.36
CLTAP09496 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.32■□□□□ 0.36
CLTAP09496 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.32■□□□□ 0.36
CLTAP09496 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLTAP09496 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms