Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAPGEF3O95398 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAPGEF3O95398 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC23.17■■□□□ 1.3
RAPGEF3O95398 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAPGEF3O95398 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
RAPGEF3O95398 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
RAPGEF3O95398 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
RAPGEF3O95398 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC23.17■■□□□ 1.3
RAPGEF3O95398 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
RAPGEF3O95398 TBC1D3J-201ENST00000620719 1426 ntBASIC23.16■■□□□ 1.3
RAPGEF3O95398 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RAPGEF3O95398 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC23.16■■□□□ 1.3
RAPGEF3O95398 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
RAPGEF3O95398 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC23.16■■□□□ 1.3
RAPGEF3O95398 AC022188.1-201ENST00000620960 1664 ntBASIC23.16■■□□□ 1.3
RAPGEF3O95398 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
RAPGEF3O95398 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RAPGEF3O95398 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC23.16■■□□□ 1.3
RAPGEF3O95398 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RAPGEF3O95398 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RAPGEF3O95398 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC23.16■■□□□ 1.3
RAPGEF3O95398 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RAPGEF3O95398 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC23.16■■□□□ 1.3
RAPGEF3O95398 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC23.16■■□□□ 1.3
RAPGEF3O95398 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC23.16■■□□□ 1.3
RAPGEF3O95398 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC23.16■■□□□ 1.3
RAPGEF3O95398 SNORD3B-2-202ENST00000571722 791 ntBASIC23.16■■□□□ 1.3
RAPGEF3O95398 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC23.16■■□□□ 1.3
RAPGEF3O95398 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC23.16■■□□□ 1.3
RAPGEF3O95398 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC23.16■■□□□ 1.3
RAPGEF3O95398 AC007718.1-201ENST00000621078 280 ntBASIC23.16■■□□□ 1.3
RAPGEF3O95398 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RAPGEF3O95398 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC23.16■■□□□ 1.3
RAPGEF3O95398 AC025271.4-201ENST00000621477 1726 ntBASIC23.16■■□□□ 1.3
RAPGEF3O95398 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RAPGEF3O95398 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC23.16■■□□□ 1.3
RAPGEF3O95398 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RAPGEF3O95398 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
RAPGEF3O95398 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RAPGEF3O95398 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
RAPGEF3O95398 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RAPGEF3O95398 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC23.15■■□□□ 1.3
RAPGEF3O95398 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RAPGEF3O95398 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RAPGEF3O95398 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RAPGEF3O95398 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
RAPGEF3O95398 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC23.15■■□□□ 1.3
RAPGEF3O95398 RN7SKP214-201ENST00000364208 315 ntBASIC23.15■■□□□ 1.3
RAPGEF3O95398 SERF2-206ENST00000409291 807 ntTSL 3 BASIC23.15■■□□□ 1.3
RAPGEF3O95398 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC23.15■■□□□ 1.3
RAPGEF3O95398 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC23.15■■□□□ 1.3
RAPGEF3O95398 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC23.15■■□□□ 1.3
RAPGEF3O95398 AC004466.1-201ENST00000599515 1080 ntBASIC23.15■■□□□ 1.3
RAPGEF3O95398 AC138894.2-201ENST00000602838 371 ntBASIC23.15■■□□□ 1.3
RAPGEF3O95398 AC051619.9-201ENST00000623237 597 ntBASIC23.15■■□□□ 1.3
RAPGEF3O95398 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RAPGEF3O95398 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RAPGEF3O95398 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RAPGEF3O95398 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RAPGEF3O95398 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RAPGEF3O95398 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC23.14■■□□□ 1.3
RAPGEF3O95398 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC23.14■■□□□ 1.3
RAPGEF3O95398 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
RAPGEF3O95398 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RAPGEF3O95398 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RAPGEF3O95398 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC23.14■■□□□ 1.3
RAPGEF3O95398 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RAPGEF3O95398 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RAPGEF3O95398 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC23.14■■□□□ 1.29
RAPGEF3O95398 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC23.14■■□□□ 1.29
RAPGEF3O95398 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC23.14■■□□□ 1.29
RAPGEF3O95398 MIR4683-201ENST00000579659 81 ntBASIC23.14■■□□□ 1.29
RAPGEF3O95398 AC242376.2-201ENST00000619355 883 ntBASIC23.14■■□□□ 1.29
RAPGEF3O95398 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC23.14■■□□□ 1.29
RAPGEF3O95398 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RAPGEF3O95398 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RAPGEF3O95398 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RAPGEF3O95398 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC23.14■■□□□ 1.29
RAPGEF3O95398 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
RAPGEF3O95398 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
RAPGEF3O95398 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC23.14■■□□□ 1.29
RAPGEF3O95398 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC23.14■■□□□ 1.29
RAPGEF3O95398 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC23.14■■□□□ 1.29
RAPGEF3O95398 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
RAPGEF3O95398 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RAPGEF3O95398 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC23.13■■□□□ 1.29
RAPGEF3O95398 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RAPGEF3O95398 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RAPGEF3O95398 CLUHP2-201ENST00000426660 1303 ntBASIC23.13■■□□□ 1.29
RAPGEF3O95398 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RAPGEF3O95398 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RAPGEF3O95398 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RAPGEF3O95398 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC23.13■■□□□ 1.29
RAPGEF3O95398 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RAPGEF3O95398 AL627231.1-201ENST00000394467 1125 ntBASIC23.13■■□□□ 1.29
RAPGEF3O95398 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC23.13■■□□□ 1.29
RAPGEF3O95398 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RAPGEF3O95398 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RAPGEF3O95398 AC009955.4-201ENST00000597192 544 ntBASIC23.13■■□□□ 1.29
RAPGEF3O95398 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms