Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCNKO75909 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.77□□□□□ -0.21
CCNKO75909 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
CCNKO75909 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC13.77□□□□□ -0.21
CCNKO75909 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.77□□□□□ -0.21
CCNKO75909 TSPY15P-201ENST00000457163 923 ntBASIC13.77□□□□□ -0.21
CCNKO75909 RASA4DP-201ENST00000460726 1199 ntBASIC13.77□□□□□ -0.21
CCNKO75909 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCNKO75909 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.77□□□□□ -0.21
CCNKO75909 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCNKO75909 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.77□□□□□ -0.21
CCNKO75909 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.77□□□□□ -0.21
CCNKO75909 AL512604.3-201ENST00000569583 964 ntBASIC13.77□□□□□ -0.21
CCNKO75909 STK25P1-201ENST00000585406 838 ntBASIC13.77□□□□□ -0.21
CCNKO75909 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
CCNKO75909 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CCNKO75909 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCNKO75909 AC010654.1-201ENST00000615722 808 ntBASIC13.77□□□□□ -0.21
CCNKO75909 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CCNKO75909 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCNKO75909 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCNKO75909 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCNKO75909 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
CCNKO75909 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCNKO75909 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCNKO75909 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCNKO75909 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.76□□□□□ -0.21
CCNKO75909 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CCNKO75909 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CCNKO75909 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 AC132938.5-201ENST00000624980 1813 ntBASIC13.76□□□□□ -0.21
CCNKO75909 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CCNKO75909 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CCNKO75909 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.76□□□□□ -0.21
CCNKO75909 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CCNKO75909 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.76□□□□□ -0.21
CCNKO75909 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC13.76□□□□□ -0.21
CCNKO75909 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC13.76□□□□□ -0.21
CCNKO75909 AC034232.1-201ENST00000506026 1064 ntBASIC13.76□□□□□ -0.21
CCNKO75909 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 PPOX-214ENST00000535223 664 ntTSL 3 BASIC13.76□□□□□ -0.21
CCNKO75909 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC13.76□□□□□ -0.21
CCNKO75909 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC13.76□□□□□ -0.21
CCNKO75909 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.76□□□□□ -0.21
CCNKO75909 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
CCNKO75909 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.76□□□□□ -0.21
CCNKO75909 AL023973.1-201ENST00000624619 620 ntBASIC13.76□□□□□ -0.21
CCNKO75909 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 AC097359.2-201ENST00000604992 2389 ntBASIC13.76□□□□□ -0.21
CCNKO75909 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CCNKO75909 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.76□□□□□ -0.21
CCNKO75909 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.76□□□□□ -0.21
CCNKO75909 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CCNKO75909 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CCNKO75909 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CCNKO75909 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.76□□□□□ -0.21
CCNKO75909 GPAA1P2-202ENST00000606848 1787 ntBASIC13.76□□□□□ -0.21
CCNKO75909 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.76□□□□□ -0.21
CCNKO75909 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCNKO75909 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC13.75□□□□□ -0.21
CCNKO75909 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCNKO75909 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CCNKO75909 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.75□□□□□ -0.21
CCNKO75909 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCNKO75909 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.75□□□□□ -0.21
CCNKO75909 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCNKO75909 MST1P2-201ENST00000457982 2291 ntBASIC13.75□□□□□ -0.21
CCNKO75909 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
CCNKO75909 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.75□□□□□ -0.21
CCNKO75909 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC13.75□□□□□ -0.21
CCNKO75909 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.75□□□□□ -0.21
CCNKO75909 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms