Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
OPHN1O60890 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.6■□□□□ 0.25
OPHN1O60890 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.6■□□□□ 0.25
OPHN1O60890 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
OPHN1O60890 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
OPHN1O60890 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
OPHN1O60890 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.6■□□□□ 0.25
OPHN1O60890 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
OPHN1O60890 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.6■□□□□ 0.25
OPHN1O60890 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
OPHN1O60890 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.6■□□□□ 0.25
OPHN1O60890 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
OPHN1O60890 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
OPHN1O60890 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
OPHN1O60890 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
OPHN1O60890 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.59■□□□□ 0.25
OPHN1O60890 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
OPHN1O60890 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
OPHN1O60890 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
OPHN1O60890 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
OPHN1O60890 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
OPHN1O60890 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.59■□□□□ 0.25
OPHN1O60890 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
OPHN1O60890 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
OPHN1O60890 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
OPHN1O60890 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
OPHN1O60890 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
OPHN1O60890 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
OPHN1O60890 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
OPHN1O60890 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
OPHN1O60890 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
OPHN1O60890 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
OPHN1O60890 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
OPHN1O60890 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
OPHN1O60890 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.59■□□□□ 0.25
OPHN1O60890 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
OPHN1O60890 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
OPHN1O60890 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.59■□□□□ 0.25
OPHN1O60890 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.59■□□□□ 0.25
OPHN1O60890 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.59■□□□□ 0.25
OPHN1O60890 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.59■□□□□ 0.25
OPHN1O60890 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.59■□□□□ 0.25
OPHN1O60890 AC084121.4-201ENST00000641598 221 ntBASIC16.59■□□□□ 0.25
OPHN1O60890 LINC02228-204ENST00000642115 2962 ntBASIC16.59■□□□□ 0.25
OPHN1O60890 AF228730.8-201ENST00000642140 221 ntBASIC16.59■□□□□ 0.25
OPHN1O60890 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
OPHN1O60890 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
OPHN1O60890 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
OPHN1O60890 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.59■□□□□ 0.25
OPHN1O60890 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
OPHN1O60890 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
OPHN1O60890 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.59■□□□□ 0.25
OPHN1O60890 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
OPHN1O60890 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
OPHN1O60890 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.59■□□□□ 0.25
OPHN1O60890 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
OPHN1O60890 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
OPHN1O60890 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
OPHN1O60890 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
OPHN1O60890 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
OPHN1O60890 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
OPHN1O60890 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
OPHN1O60890 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
OPHN1O60890 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
OPHN1O60890 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
OPHN1O60890 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
OPHN1O60890 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
OPHN1O60890 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
OPHN1O60890 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
OPHN1O60890 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
OPHN1O60890 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.58■□□□□ 0.25
OPHN1O60890 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
OPHN1O60890 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
OPHN1O60890 PIN1P1-201ENST00000412108 996 ntBASIC16.58■□□□□ 0.24
OPHN1O60890 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.58■□□□□ 0.24
OPHN1O60890 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.58■□□□□ 0.24
OPHN1O60890 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
OPHN1O60890 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.58■□□□□ 0.24
OPHN1O60890 ALG1L8P-201ENST00000533887 760 ntBASIC16.58■□□□□ 0.24
OPHN1O60890 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.58■□□□□ 0.24
OPHN1O60890 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.58■□□□□ 0.24
OPHN1O60890 AC009118.2-201ENST00000613275 655 ntBASIC16.58■□□□□ 0.24
OPHN1O60890 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
OPHN1O60890 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
OPHN1O60890 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
OPHN1O60890 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
OPHN1O60890 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
OPHN1O60890 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
OPHN1O60890 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
OPHN1O60890 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
OPHN1O60890 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
OPHN1O60890 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.58■□□□□ 0.24
OPHN1O60890 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
OPHN1O60890 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
OPHN1O60890 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
OPHN1O60890 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.58■□□□□ 0.24
OPHN1O60890 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
OPHN1O60890 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
OPHN1O60890 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.58■□□□□ 0.24
OPHN1O60890 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms