Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRICKLE3O43900 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRICKLE3O43900 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PRICKLE3O43900 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PRICKLE3O43900 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE3O43900 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PRICKLE3O43900 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE3O43900 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE3O43900 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE3O43900 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE3O43900 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PRICKLE3O43900 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE3O43900 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE3O43900 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE3O43900 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE3O43900 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE3O43900 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE3O43900 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE3O43900 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE3O43900 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.14■□□□□ 0.01
PRICKLE3O43900 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE3O43900 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE3O43900 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
PRICKLE3O43900 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE3O43900 PIN1P1-201ENST00000412108 996 ntBASIC15.14■□□□□ 0.01
PRICKLE3O43900 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.14■□□□□ 0.01
PRICKLE3O43900 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.14■□□□□ 0.01
PRICKLE3O43900 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.14■□□□□ 0.01
PRICKLE3O43900 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.14■□□□□ 0.01
PRICKLE3O43900 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.14■□□□□ 0.01
PRICKLE3O43900 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PRICKLE3O43900 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.14■□□□□ 0.01
PRICKLE3O43900 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
PRICKLE3O43900 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.14■□□□□ 0.01
PRICKLE3O43900 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.14■□□□□ 0.01
PRICKLE3O43900 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
PRICKLE3O43900 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE3O43900 AC099568.2-201ENST00000609194 695 ntBASIC15.14■□□□□ 0.01
PRICKLE3O43900 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.14■□□□□ 0.01
PRICKLE3O43900 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE3O43900 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE3O43900 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.14■□□□□ 0.01
PRICKLE3O43900 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE3O43900 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.14■□□□□ 0.01
PRICKLE3O43900 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PRICKLE3O43900 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.14■□□□□ 0.01
PRICKLE3O43900 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE3O43900 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PRICKLE3O43900 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.14■□□□□ 0.01
PRICKLE3O43900 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE3O43900 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE3O43900 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.14■□□□□ 0.01
PRICKLE3O43900 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE3O43900 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.14■□□□□ 0.01
PRICKLE3O43900 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE3O43900 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.14■□□□□ 0.01
PRICKLE3O43900 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE3O43900 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE3O43900 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE3O43900 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE3O43900 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE3O43900 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE3O43900 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE3O43900 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.13■□□□□ 0.01
PRICKLE3O43900 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE3O43900 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.13■□□□□ 0.01
PRICKLE3O43900 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE3O43900 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.13■□□□□ 0.01
PRICKLE3O43900 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE3O43900 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.13■□□□□ 0.01
PRICKLE3O43900 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE3O43900 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE3O43900 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE3O43900 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE3O43900 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.13■□□□□ 0.01
PRICKLE3O43900 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE3O43900 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE3O43900 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.13■□□□□ 0.01
PRICKLE3O43900 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.13■□□□□ 0.01
PRICKLE3O43900 CICP13-201ENST00000422015 2789 ntBASIC15.13■□□□□ 0.01
PRICKLE3O43900 MEP1AP4-201ENST00000423244 1087 ntBASIC15.13■□□□□ 0.01
PRICKLE3O43900 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
PRICKLE3O43900 DFFBP1-201ENST00000433250 979 ntBASIC15.13■□□□□ 0.01
PRICKLE3O43900 AL353779.1-201ENST00000434793 351 ntBASIC15.13■□□□□ 0.01
PRICKLE3O43900 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE3O43900 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.13■□□□□ 0.01
PRICKLE3O43900 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.13■□□□□ 0.01
PRICKLE3O43900 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.13■□□□□ 0.01
PRICKLE3O43900 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.13■□□□□ 0.01
PRICKLE3O43900 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.13■□□□□ 0.01
PRICKLE3O43900 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE3O43900 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PRICKLE3O43900 AL132655.2-201ENST00000596276 594 ntBASIC15.13■□□□□ 0.01
PRICKLE3O43900 AC004233.3-201ENST00000607794 1269 ntBASIC15.13■□□□□ 0.01
PRICKLE3O43900 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.13■□□□□ 0.01
PRICKLE3O43900 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PRICKLE3O43900 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE3O43900 AC105250.1-201ENST00000509378 2057 ntBASIC15.13■□□□□ 0.01
PRICKLE3O43900 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE3O43900 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms