Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDB2O43679 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDB2O43679 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDB2O43679 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LDB2O43679 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LDB2O43679 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.8■□□□□ 0.12
LDB2O43679 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDB2O43679 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.79■□□□□ 0.12
LDB2O43679 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LDB2O43679 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LDB2O43679 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.79■□□□□ 0.12
LDB2O43679 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.79■□□□□ 0.12
LDB2O43679 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.79■□□□□ 0.12
LDB2O43679 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.79■□□□□ 0.12
LDB2O43679 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LDB2O43679 AC100757.3-201ENST00000622361 1406 ntBASIC15.79■□□□□ 0.12
LDB2O43679 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.79■□□□□ 0.12
LDB2O43679 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LDB2O43679 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LDB2O43679 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDB2O43679 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LDB2O43679 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LDB2O43679 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
LDB2O43679 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LDB2O43679 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.79■□□□□ 0.12
LDB2O43679 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.79■□□□□ 0.12
LDB2O43679 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.79■□□□□ 0.12
LDB2O43679 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
LDB2O43679 RN7SL618P-201ENST00000477850 296 ntBASIC15.79■□□□□ 0.12
LDB2O43679 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.79■□□□□ 0.12
LDB2O43679 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.79■□□□□ 0.12
LDB2O43679 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LDB2O43679 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.79■□□□□ 0.12
LDB2O43679 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.79■□□□□ 0.12
LDB2O43679 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.79■□□□□ 0.12
LDB2O43679 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.79■□□□□ 0.12
LDB2O43679 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LDB2O43679 AL590560.3-201ENST00000623350 461 ntBASIC15.79■□□□□ 0.12
LDB2O43679 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.79■□□□□ 0.12
LDB2O43679 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.79■□□□□ 0.12
LDB2O43679 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LDB2O43679 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
LDB2O43679 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDB2O43679 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDB2O43679 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.79■□□□□ 0.12
LDB2O43679 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDB2O43679 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDB2O43679 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDB2O43679 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDB2O43679 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LDB2O43679 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDB2O43679 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.79■□□□□ 0.12
LDB2O43679 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDB2O43679 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.79■□□□□ 0.12
LDB2O43679 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDB2O43679 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LDB2O43679 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LDB2O43679 LINC00554-201ENST00000564841 3011 ntBASIC15.78■□□□□ 0.12
LDB2O43679 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.78■□□□□ 0.12
LDB2O43679 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.78■□□□□ 0.12
LDB2O43679 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.78■□□□□ 0.12
LDB2O43679 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.78■□□□□ 0.12
LDB2O43679 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
LDB2O43679 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
LDB2O43679 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.78■□□□□ 0.12
LDB2O43679 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.78■□□□□ 0.12
LDB2O43679 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.78■□□□□ 0.12
LDB2O43679 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.78■□□□□ 0.12
LDB2O43679 TSSK5P-201ENST00000423978 907 ntBASIC15.78■□□□□ 0.12
LDB2O43679 KRT18P64-201ENST00000434946 1219 ntBASIC15.78■□□□□ 0.12
LDB2O43679 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.78■□□□□ 0.12
LDB2O43679 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.78■□□□□ 0.12
LDB2O43679 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.78■□□□□ 0.12
LDB2O43679 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.78■□□□□ 0.12
LDB2O43679 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.78■□□□□ 0.12
LDB2O43679 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.78■□□□□ 0.12
LDB2O43679 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.78■□□□□ 0.12
LDB2O43679 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LDB2O43679 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.78■□□□□ 0.12
LDB2O43679 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms