Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A1O14983 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.03■□□□□ 0.48
ATP2A1O14983 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A1O14983 AC005252.2-201ENST00000624630 1141 ntBASIC18.03■□□□□ 0.48
ATP2A1O14983 AL033527.4-201ENST00000641026 673 ntBASIC18.03■□□□□ 0.48
ATP2A1O14983 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A1O14983 DRD5P1-201ENST00000456605 1438 ntBASIC18.03■□□□□ 0.48
ATP2A1O14983 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.03■□□□□ 0.48
ATP2A1O14983 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.03■□□□□ 0.48
ATP2A1O14983 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.03■□□□□ 0.48
ATP2A1O14983 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.03■□□□□ 0.48
ATP2A1O14983 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A1O14983 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A1O14983 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.03■□□□□ 0.48
ATP2A1O14983 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A1O14983 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.03■□□□□ 0.48
ATP2A1O14983 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2A1O14983 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
ATP2A1O14983 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
ATP2A1O14983 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2A1O14983 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.02■□□□□ 0.48
ATP2A1O14983 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.02■□□□□ 0.48
ATP2A1O14983 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2A1O14983 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ATP2A1O14983 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2A1O14983 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2A1O14983 ACKR1-201ENST00000368121 1240 ntBASIC18.02■□□□□ 0.48
ATP2A1O14983 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.02■□□□□ 0.48
ATP2A1O14983 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2A1O14983 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
ATP2A1O14983 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2A1O14983 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2A1O14983 BAATP1-201ENST00000412284 1225 ntBASIC18.02■□□□□ 0.48
ATP2A1O14983 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2A1O14983 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.02■□□□□ 0.48
ATP2A1O14983 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ATP2A1O14983 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
ATP2A1O14983 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.02■□□□□ 0.48
ATP2A1O14983 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.02■□□□□ 0.48
ATP2A1O14983 AC012441.1-201ENST00000446669 685 ntBASIC18.02■□□□□ 0.48
ATP2A1O14983 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.02■□□□□ 0.48
ATP2A1O14983 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
ATP2A1O14983 AP000812.2-201ENST00000538934 718 ntBASIC18.02■□□□□ 0.48
ATP2A1O14983 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.02■□□□□ 0.48
ATP2A1O14983 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2A1O14983 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2A1O14983 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP2A1O14983 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.02■□□□□ 0.47
ATP2A1O14983 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
ATP2A1O14983 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.02■□□□□ 0.47
ATP2A1O14983 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATP2A1O14983 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATP2A1O14983 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.02■□□□□ 0.47
ATP2A1O14983 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.47
ATP2A1O14983 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP2A1O14983 AC093525.8-201ENST00000624099 1342 ntBASIC18.01■□□□□ 0.47
ATP2A1O14983 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP2A1O14983 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
ATP2A1O14983 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2A1O14983 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
ATP2A1O14983 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2A1O14983 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2A1O14983 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
ATP2A1O14983 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP2A1O14983 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP2A1O14983 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.01■□□□□ 0.47
ATP2A1O14983 KLF2P4-201ENST00000451959 1225 ntBASIC18.01■□□□□ 0.47
ATP2A1O14983 GAPDHP40-201ENST00000505218 1006 ntBASIC18.01■□□□□ 0.47
ATP2A1O14983 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2A1O14983 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.01■□□□□ 0.47
ATP2A1O14983 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.01■□□□□ 0.47
ATP2A1O14983 AC093813.1-201ENST00000605066 256 ntBASIC18.01■□□□□ 0.47
ATP2A1O14983 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.01■□□□□ 0.47
ATP2A1O14983 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2A1O14983 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.01■□□□□ 0.47
ATP2A1O14983 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
ATP2A1O14983 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2A1O14983 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP2A1O14983 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2A1O14983 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2A1O14983 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2A1O14983 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2A1O14983 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP2A1O14983 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
ATP2A1O14983 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP2A1O14983 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP2A1O14983 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATP2A1O14983 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATP2A1O14983 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATP2A1O14983 AL118508.1-201ENST00000613502 2345 ntBASIC18■□□□□ 0.47
ATP2A1O14983 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATP2A1O14983 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
ATP2A1O14983 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATP2A1O14983 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATP2A1O14983 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
ATP2A1O14983 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATP2A1O14983 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18■□□□□ 0.47
ATP2A1O14983 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18■□□□□ 0.47
ATP2A1O14983 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18■□□□□ 0.47
ATP2A1O14983 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms