Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 PCDHA1-201ENST00000378133 2726 ntBASIC11.29□□□□□ -0.6
LYRM9A8MSI8 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 AC010491.1-201ENST00000563101 2797 ntBASIC11.28□□□□□ -0.6
LYRM9A8MSI8 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 AC015922.1-201ENST00000421102 1152 ntBASIC11.28□□□□□ -0.6
LYRM9A8MSI8 MEP1AP4-201ENST00000423244 1087 ntBASIC11.28□□□□□ -0.6
LYRM9A8MSI8 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 CMC2-214ENST00000565925 640 ntTSL 5 BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 TEX48-202ENST00000612244 662 ntTSL 3 BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC11.28□□□□□ -0.6
LYRM9A8MSI8 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC11.27□□□□□ -0.6
LYRM9A8MSI8 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LYRM9A8MSI8 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
LYRM9A8MSI8 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LYRM9A8MSI8 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
LYRM9A8MSI8 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
LYRM9A8MSI8 DEK-201ENST00000244776 1441 ntTSL 2 BASIC11.27□□□□□ -0.6
LYRM9A8MSI8 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
LYRM9A8MSI8 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LYRM9A8MSI8 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
LYRM9A8MSI8 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LYRM9A8MSI8 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LYRM9A8MSI8 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
LYRM9A8MSI8 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
LYRM9A8MSI8 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LYRM9A8MSI8 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LYRM9A8MSI8 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LYRM9A8MSI8 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
LYRM9A8MSI8 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
LYRM9A8MSI8 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LYRM9A8MSI8 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
LYRM9A8MSI8 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC11.27□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms