Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC23.01■■□□□ 1.27
HFM1A2PYH4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC23.01■■□□□ 1.27
HFM1A2PYH4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
HFM1A2PYH4 AL022328.1-201ENST00000610050 478 ntBASIC23.01■■□□□ 1.27
HFM1A2PYH4 BX539320.1-201ENST00000623759 877 ntBASIC23.01■■□□□ 1.27
HFM1A2PYH4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
HFM1A2PYH4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
HFM1A2PYH4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HFM1A2PYH4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
HFM1A2PYH4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
HFM1A2PYH4 AC148477.4-201ENST00000613430 1793 ntBASIC23.01■■□□□ 1.27
HFM1A2PYH4 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
HFM1A2PYH4 KRT8P14-201ENST00000414254 1442 ntBASIC23.01■■□□□ 1.27
HFM1A2PYH4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
HFM1A2PYH4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC23.01■■□□□ 1.27
HFM1A2PYH4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
HFM1A2PYH4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
HFM1A2PYH4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
HFM1A2PYH4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
HFM1A2PYH4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
HFM1A2PYH4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
HFM1A2PYH4 BID-213ENST00000615414 2236 ntTSL 5 BASIC23.01■■□□□ 1.27
HFM1A2PYH4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
HFM1A2PYH4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC23.01■■□□□ 1.27
HFM1A2PYH4 AC134312.5-201ENST00000568031 1313 ntBASIC23.01■■□□□ 1.27
HFM1A2PYH4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC23■■□□□ 1.27
HFM1A2PYH4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HFM1A2PYH4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
HFM1A2PYH4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
HFM1A2PYH4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
HFM1A2PYH4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
HFM1A2PYH4 KLF2P2-201ENST00000416807 1039 ntBASIC23■■□□□ 1.27
HFM1A2PYH4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC23■■□□□ 1.27
HFM1A2PYH4 AC234783.1-201ENST00000441761 496 ntBASIC23■■□□□ 1.27
HFM1A2PYH4 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC23■■□□□ 1.27
HFM1A2PYH4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
HFM1A2PYH4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC23■■□□□ 1.27
HFM1A2PYH4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC23■■□□□ 1.27
HFM1A2PYH4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HFM1A2PYH4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HFM1A2PYH4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HFM1A2PYH4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HFM1A2PYH4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
HFM1A2PYH4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
HFM1A2PYH4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC23■■□□□ 1.27
HFM1A2PYH4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
HFM1A2PYH4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HFM1A2PYH4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HFM1A2PYH4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HFM1A2PYH4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC23■■□□□ 1.27
HFM1A2PYH4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
HFM1A2PYH4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
HFM1A2PYH4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC23■■□□□ 1.27
HFM1A2PYH4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
HFM1A2PYH4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
HFM1A2PYH4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
HFM1A2PYH4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
HFM1A2PYH4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HFM1A2PYH4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC23■■□□□ 1.27
HFM1A2PYH4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
HFM1A2PYH4 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC22.99■■□□□ 1.27
HFM1A2PYH4 AL645937.2-201ENST00000396808 931 ntBASIC22.99■■□□□ 1.27
HFM1A2PYH4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
HFM1A2PYH4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC22.99■■□□□ 1.27
HFM1A2PYH4 USB1-202ENST00000423271 1217 ntTSL 2 BASIC22.99■■□□□ 1.27
HFM1A2PYH4 HLA-K-203ENST00000430151 1046 ntBASIC22.99■■□□□ 1.27
HFM1A2PYH4 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
HFM1A2PYH4 AL355864.2-201ENST00000447420 863 ntBASIC22.99■■□□□ 1.27
HFM1A2PYH4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
HFM1A2PYH4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
HFM1A2PYH4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
HFM1A2PYH4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC22.99■■□□□ 1.27
HFM1A2PYH4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC22.99■■□□□ 1.27
HFM1A2PYH4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
HFM1A2PYH4 REXO1L4P-201ENST00000605109 1937 ntBASIC22.99■■□□□ 1.27
HFM1A2PYH4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
HFM1A2PYH4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
HFM1A2PYH4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC22.99■■□□□ 1.27
HFM1A2PYH4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
HFM1A2PYH4 AL158070.2-201ENST00000623713 1621 ntBASIC22.99■■□□□ 1.27
HFM1A2PYH4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
HFM1A2PYH4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC22.99■■□□□ 1.27
HFM1A2PYH4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
HFM1A2PYH4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
HFM1A2PYH4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
HFM1A2PYH4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
HFM1A2PYH4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
HFM1A2PYH4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
HFM1A2PYH4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC22.99■■□□□ 1.27
HFM1A2PYH4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC22.99■■□□□ 1.27
HFM1A2PYH4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
HFM1A2PYH4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
HFM1A2PYH4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
HFM1A2PYH4 KRT43P-201ENST00000434019 910 ntBASIC22.99■■□□□ 1.27
HFM1A2PYH4 FTH1P14-201ENST00000482930 551 ntBASIC22.99■■□□□ 1.27
HFM1A2PYH4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC22.99■■□□□ 1.27
HFM1A2PYH4 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC22.99■■□□□ 1.27
HFM1A2PYH4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
HFM1A2PYH4 Six3os1_5.1-201ENST00000611000 271 ntBASIC22.99■■□□□ 1.27
HFM1A2PYH4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms