Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.8□□□□□ -0.2
SHISA3A0PJX4 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 INTS4P1-203ENST00000641008 3683 ntBASIC13.8□□□□□ -0.2
SHISA3A0PJX4 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 AC092474.2-201ENST00000424288 719 ntBASIC13.8□□□□□ -0.2
SHISA3A0PJX4 FAM8A3P-201ENST00000427218 844 ntBASIC13.8□□□□□ -0.2
SHISA3A0PJX4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 AC012640.2-201ENST00000561606 901 ntBASIC13.8□□□□□ -0.2
SHISA3A0PJX4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 CLEC4GP1-201ENST00000596555 870 ntBASIC13.8□□□□□ -0.2
SHISA3A0PJX4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 AC012183.1-201ENST00000625197 499 ntBASIC13.8□□□□□ -0.2
SHISA3A0PJX4 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 PMS2P7-201ENST00000506558 1336 ntBASIC13.8□□□□□ -0.2
SHISA3A0PJX4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SHISA3A0PJX4 AP001267.2-201ENST00000532619 2086 ntBASIC13.79□□□□□ -0.2
SHISA3A0PJX4 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 AL137784.3-201ENST00000623858 2288 ntBASIC13.79□□□□□ -0.2
SHISA3A0PJX4 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.79□□□□□ -0.2
SHISA3A0PJX4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 AC243562.2-201ENST00000561247 970 ntBASIC13.79□□□□□ -0.2
SHISA3A0PJX4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.79□□□□□ -0.2
SHISA3A0PJX4 AC008735.5-201ENST00000623544 497 ntBASIC13.79□□□□□ -0.2
SHISA3A0PJX4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.79□□□□□ -0.2
SHISA3A0PJX4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SHISA3A0PJX4 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms