Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 AC026748.1-201ENST00000624349 3251 ntBASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 AC087481.3-201ENST00000602886 1894 ntBASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 AC004877.2-201ENST00000623941 599 ntBASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RNF103-CHMP3A0A140T963 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.33■□□□□ 0.05
RNF103-CHMP3A0A140T963 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RNF103-CHMP3A0A140T963 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RNF103-CHMP3A0A140T963 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RNF103-CHMP3A0A140T963 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.33■□□□□ 0.05
RNF103-CHMP3A0A140T963 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
RNF103-CHMP3A0A140T963 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.33■□□□□ 0.05
RNF103-CHMP3A0A140T963 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RNF103-CHMP3A0A140T963 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RNF103-CHMP3A0A140T963 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 AC140658.5-201ENST00000438532 169 ntBASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.33■□□□□ 0.04
RNF103-CHMP3A0A140T963 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 AC126335.2-201ENST00000623362 4637 ntBASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms