Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 MROH4P-201ENST00000431302 1578 ntBASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 AC073621.1-201ENST00000392730 636 ntBASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 MRPL20P1-201ENST00000400819 433 ntBASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 KRT18P27-201ENST00000427733 1299 ntBASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 FAM185BP-201ENST00000443595 716 ntBASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 IGHV3-65-201ENST00000523210 341 ntBASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 ACTL9-202ENST00000612068 1252 ntBASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 AC148477.4-201ENST00000613430 1793 ntBASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 GRK6P1-201ENST00000400595 1711 ntBASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 CICP4-201ENST00000447359 2812 ntBASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV18A0A075B6X5 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 AC126335.2-201ENST00000623362 4637 ntBASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV18A0A075B6X5 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms