Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 AL589987.1-201ENST00000453380 819 ntBASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 SERBP1P5-201ENST00000510079 1181 ntBASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 AC104794.3-201ENST00000566840 1248 ntBASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 AC092850.2-201ENST00000623821 2697 ntBASIC15.96■□□□□ 0.15
PCDHGC4Q9Y5F7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGC4Q9Y5F7 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.96■□□□□ 0.14
PCDHGC4Q9Y5F7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.96■□□□□ 0.14
PCDHGC4Q9Y5F7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.96■□□□□ 0.14
PCDHGC4Q9Y5F7 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGC4Q9Y5F7 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGC4Q9Y5F7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
PCDHGC4Q9Y5F7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 AC236430.1-201ENST00000402231 743 ntBASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 RPL13P2-201ENST00000440687 659 ntBASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 LINC02560-201ENST00000596379 459 ntBASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 AC092364.2-202ENST00000597012 1073 ntBASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 SRD5A3P1-201ENST00000603021 949 ntBASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 AC004790.1-201ENST00000612686 536 ntBASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.95■□□□□ 0.14
PCDHGC4Q9Y5F7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGC4Q9Y5F7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGC4Q9Y5F7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGC4Q9Y5F7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGC4Q9Y5F7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGC4Q9Y5F7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGC4Q9Y5F7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGC4Q9Y5F7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGC4Q9Y5F7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGC4Q9Y5F7 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGC4Q9Y5F7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGC4Q9Y5F7 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.94■□□□□ 0.14
PCDHGC4Q9Y5F7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms