Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 AC013726.1-201ENST00000563747 2285 ntBASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 AC092127.1-201ENST00000567093 3455 ntBASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 C18orf15-201ENST00000623680 2534 ntBASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
KCNIP3Q9Y2W7 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 AC023908.3-201ENST00000564211 3047 ntBASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 AC026748.1-201ENST00000624349 3251 ntBASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 PMS2P4-201ENST00000412466 1052 ntBASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
KCNIP3Q9Y2W7 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 AC112693.3-201ENST00000624819 1983 ntBASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 AC211429.1-201ENST00000415277 523 ntBASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 DMBT1P1-203ENST00000636837 4628 ntBASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
KCNIP3Q9Y2W7 MROH4P-201ENST00000431302 1578 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms