Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CLIP2Q9UDT6 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CLIP2Q9UDT6 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLIP2Q9UDT6 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CLIP2Q9UDT6 SPDYE19P-201ENST00000338590 713 ntBASIC18.79■□□□□ 0.6
CLIP2Q9UDT6 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.79■□□□□ 0.6
CLIP2Q9UDT6 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.79■□□□□ 0.6
CLIP2Q9UDT6 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
CLIP2Q9UDT6 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.79■□□□□ 0.6
CLIP2Q9UDT6 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.79■□□□□ 0.6
CLIP2Q9UDT6 DOC2GP-202ENST00000514950 1163 ntBASIC18.79■□□□□ 0.6
CLIP2Q9UDT6 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.79■□□□□ 0.6
CLIP2Q9UDT6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.79■□□□□ 0.6
CLIP2Q9UDT6 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CLIP2Q9UDT6 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLIP2Q9UDT6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.79■□□□□ 0.6
CLIP2Q9UDT6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLIP2Q9UDT6 AL132655.2-201ENST00000596276 594 ntBASIC18.79■□□□□ 0.6
CLIP2Q9UDT6 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLIP2Q9UDT6 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.79■□□□□ 0.6
CLIP2Q9UDT6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLIP2Q9UDT6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLIP2Q9UDT6 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLIP2Q9UDT6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLIP2Q9UDT6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.79■□□□□ 0.6
CLIP2Q9UDT6 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLIP2Q9UDT6 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 BNIP3P1-202ENST00000550043 1585 ntBASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 AC025048.6-201ENST00000634326 1161 ntBASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 AC126177.1-201ENST00000547829 2218 ntBASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIP2Q9UDT6 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 AC006449.6-201ENST00000612330 2296 ntBASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 API5-211ENST00000534695 560 ntTSL 5 BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 SRD5A3P1-201ENST00000603021 949 ntBASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CLIP2Q9UDT6 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLIP2Q9UDT6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.77■□□□□ 0.59
CLIP2Q9UDT6 AL596087.1-201ENST00000400979 1969 ntBASIC18.77■□□□□ 0.59
CLIP2Q9UDT6 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms