Protein–RNA interactions for Protein: Q9HCU9

BRMS1, Breast cancer metastasis-suppressor 1, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRMS1Q9HCU9 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRMS1Q9HCU9 FO393414.2-201ENST00000405153 598 ntBASIC18.32■□□□□ 0.52
BRMS1Q9HCU9 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
BRMS1Q9HCU9 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.32■□□□□ 0.52
BRMS1Q9HCU9 AC125807.1-201ENST00000483097 614 ntBASIC18.32■□□□□ 0.52
BRMS1Q9HCU9 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.32■□□□□ 0.52
BRMS1Q9HCU9 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.32■□□□□ 0.52
BRMS1Q9HCU9 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.32■□□□□ 0.52
BRMS1Q9HCU9 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRMS1Q9HCU9 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
BRMS1Q9HCU9 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.32■□□□□ 0.52
BRMS1Q9HCU9 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
BRMS1Q9HCU9 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRMS1Q9HCU9 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
BRMS1Q9HCU9 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.32■□□□□ 0.52
BRMS1Q9HCU9 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRMS1Q9HCU9 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
BRMS1Q9HCU9 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.32■□□□□ 0.52
BRMS1Q9HCU9 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRMS1Q9HCU9 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
BRMS1Q9HCU9 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRMS1Q9HCU9 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRMS1Q9HCU9 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRMS1Q9HCU9 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRMS1Q9HCU9 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRMS1Q9HCU9 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRMS1Q9HCU9 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRMS1Q9HCU9 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 TUBB3P1-201ENST00000405796 1332 ntBASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 AC067863.1-201ENST00000494933 530 ntBASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 AL079307.3-201ENST00000556114 283 ntBASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRMS1Q9HCU9 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 KRT8P12-202ENST00000472924 1397 ntBASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 SERBP1P3-201ENST00000459980 809 ntBASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BRMS1Q9HCU9 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms