Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.05□□□□□ -0.16
COMMD4Q9H0A8 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COMMD4Q9H0A8 AC023141.13-201ENST00000604991 943 ntBASIC14.05□□□□□ -0.16
COMMD4Q9H0A8 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.05□□□□□ -0.16
COMMD4Q9H0A8 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
COMMD4Q9H0A8 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
COMMD4Q9H0A8 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COMMD4Q9H0A8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
COMMD4Q9H0A8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.05□□□□□ -0.16
COMMD4Q9H0A8 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COMMD4Q9H0A8 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.05□□□□□ -0.16
COMMD4Q9H0A8 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
COMMD4Q9H0A8 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
COMMD4Q9H0A8 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COMMD4Q9H0A8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.05□□□□□ -0.16
COMMD4Q9H0A8 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
COMMD4Q9H0A8 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COMMD4Q9H0A8 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COMMD4Q9H0A8 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COMMD4Q9H0A8 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
COMMD4Q9H0A8 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COMMD4Q9H0A8 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.05□□□□□ -0.16
COMMD4Q9H0A8 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COMMD4Q9H0A8 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.05□□□□□ -0.16
COMMD4Q9H0A8 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.05□□□□□ -0.16
COMMD4Q9H0A8 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
COMMD4Q9H0A8 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COMMD4Q9H0A8 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 AL450487.1-201ENST00000426799 995 ntBASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 UNC93B6-202ENST00000528242 690 ntBASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 AC096734.2-201ENST00000562054 433 ntBASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 AL773604.1-201ENST00000617417 272 ntBASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 AC148477.8-201ENST00000624298 468 ntBASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 C18orf15-201ENST00000623680 2534 ntBASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.04□□□□□ -0.16
COMMD4Q9H0A8 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COMMD4Q9H0A8 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms