Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM2Q9C040 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.62□□□□□ -0.07
TRIM2Q9C040 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRIM2Q9C040 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM2Q9C040 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.62□□□□□ -0.07
TRIM2Q9C040 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM2Q9C040 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM2Q9C040 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM2Q9C040 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM2Q9C040 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
TRIM2Q9C040 CICP13-201ENST00000422015 2789 ntBASIC14.62□□□□□ -0.07
TRIM2Q9C040 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.62□□□□□ -0.07
TRIM2Q9C040 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM2Q9C040 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM2Q9C040 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.62□□□□□ -0.07
TRIM2Q9C040 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.62□□□□□ -0.07
TRIM2Q9C040 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.62□□□□□ -0.07
TRIM2Q9C040 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.62□□□□□ -0.07
TRIM2Q9C040 SLC25A39P2-201ENST00000537614 270 ntBASIC14.62□□□□□ -0.07
TRIM2Q9C040 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM2Q9C040 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRIM2Q9C040 AC027612.4-201ENST00000605371 583 ntBASIC14.62□□□□□ -0.07
TRIM2Q9C040 AL513210.1-201ENST00000629608 234 ntBASIC14.62□□□□□ -0.07
TRIM2Q9C040 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.62□□□□□ -0.07
TRIM2Q9C040 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM2Q9C040 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.62□□□□□ -0.07
TRIM2Q9C040 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TRIM2Q9C040 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM2Q9C040 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM2Q9C040 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRIM2Q9C040 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRIM2Q9C040 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM2Q9C040 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM2Q9C040 OR2I1P-209ENST00000641730 5365 ntBASIC14.62□□□□□ -0.07
TRIM2Q9C040 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.62□□□□□ -0.07
TRIM2Q9C040 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRIM2Q9C040 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.62□□□□□ -0.07
TRIM2Q9C040 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
TRIM2Q9C040 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.62□□□□□ -0.07
TRIM2Q9C040 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.62□□□□□ -0.07
TRIM2Q9C040 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM2Q9C040 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM2Q9C040 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM2Q9C040 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM2Q9C040 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM2Q9C040 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM2Q9C040 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM2Q9C040 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRIM2Q9C040 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM2Q9C040 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRIM2Q9C040 AP3S2-216ENST00000617003 1561 ntBASIC14.61□□□□□ -0.07
TRIM2Q9C040 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM2Q9C040 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM2Q9C040 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM2Q9C040 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM2Q9C040 AL513477.1-201ENST00000602865 2407 ntBASIC14.61□□□□□ -0.07
TRIM2Q9C040 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM2Q9C040 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM2Q9C040 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM2Q9C040 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM2Q9C040 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM2Q9C040 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM2Q9C040 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM2Q9C040 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
TRIM2Q9C040 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM2Q9C040 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM2Q9C040 HMGN1P19-201ENST00000436976 333 ntBASIC14.61□□□□□ -0.07
TRIM2Q9C040 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM2Q9C040 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.61□□□□□ -0.07
TRIM2Q9C040 AC069335.1-201ENST00000489972 472 ntBASIC14.61□□□□□ -0.07
TRIM2Q9C040 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.61□□□□□ -0.07
TRIM2Q9C040 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM2Q9C040 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.61□□□□□ -0.07
TRIM2Q9C040 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.61□□□□□ -0.07
TRIM2Q9C040 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM2Q9C040 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRIM2Q9C040 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM2Q9C040 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.61□□□□□ -0.07
TRIM2Q9C040 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.61□□□□□ -0.07
TRIM2Q9C040 AC105339.1-204ENST00000636249 355 ntBASIC14.61□□□□□ -0.07
TRIM2Q9C040 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM2Q9C040 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM2Q9C040 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM2Q9C040 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM2Q9C040 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM2Q9C040 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM2Q9C040 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
TRIM2Q9C040 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.61□□□□□ -0.07
TRIM2Q9C040 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.61□□□□□ -0.07
TRIM2Q9C040 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.61□□□□□ -0.07
TRIM2Q9C040 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM2Q9C040 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM2Q9C040 AC087481.3-201ENST00000602886 1894 ntBASIC14.61□□□□□ -0.07
TRIM2Q9C040 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM2Q9C040 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM2Q9C040 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM2Q9C040 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRIM2Q9C040 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRIM2Q9C040 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
TRIM2Q9C040 AL136982.4-201ENST00000437689 1740 ntBASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms