Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 AC132938.5-201ENST00000624980 1813 ntBASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 SIGLEC16-201ENST00000599858 1437 ntBASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NDUFAF3Q9BU61 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 PMPCAP1-201ENST00000508114 1576 ntBASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 RPS2P1-201ENST00000434010 821 ntBASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 RNA5SP419-201ENST00000515908 135 ntBASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NDUFAF3Q9BU61 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 STX3-203ENST00000529177 1571 ntTSL 2 BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 RPL13AP23-201ENST00000480739 586 ntBASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 MTDHP4-201ENST00000600287 670 ntBASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 MIR7706-201ENST00000613747 67 ntBASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms