Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.02■□□□□ -0
TUBA1CQ9BQE3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.02■□□□□ -0
TUBA1CQ9BQE3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.02■□□□□ -0
TUBA1CQ9BQE3 TFAMP1-201ENST00000412727 736 ntBASIC15.02■□□□□ -0
TUBA1CQ9BQE3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TUBA1CQ9BQE3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TUBA1CQ9BQE3 SPDYE11-202ENST00000450699 704 ntBASIC15.02■□□□□ -0
TUBA1CQ9BQE3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.02■□□□□ -0
TUBA1CQ9BQE3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.02■□□□□ -0
TUBA1CQ9BQE3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TUBA1CQ9BQE3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.02■□□□□ -0
TUBA1CQ9BQE3 KRT8P48-201ENST00000515599 1220 ntBASIC15.02■□□□□ -0
TUBA1CQ9BQE3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.02■□□□□ -0
TUBA1CQ9BQE3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.02■□□□□ -0
TUBA1CQ9BQE3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.02■□□□□ -0
TUBA1CQ9BQE3 RARRES2P8-201ENST00000566335 367 ntBASIC15.02■□□□□ -0
TUBA1CQ9BQE3 SPDYE9P-201ENST00000570642 692 ntBASIC15.02■□□□□ -0
TUBA1CQ9BQE3 CYP2A7P1-201ENST00000595391 815 ntBASIC15.02■□□□□ -0
TUBA1CQ9BQE3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TUBA1CQ9BQE3 SPDYE10P-202ENST00000612005 668 ntBASIC15.02■□□□□ -0
TUBA1CQ9BQE3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.02■□□□□ -0
TUBA1CQ9BQE3 SPDYE8P-202ENST00000612377 668 ntBASIC15.02■□□□□ -0
TUBA1CQ9BQE3 AL161645.1-201ENST00000622716 1255 ntBASIC15.02■□□□□ -0
TUBA1CQ9BQE3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TUBA1CQ9BQE3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.02□□□□□ -0.01
TUBA1CQ9BQE3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TUBA1CQ9BQE3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.02□□□□□ -0.01
TUBA1CQ9BQE3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TUBA1CQ9BQE3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TUBA1CQ9BQE3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
TUBA1CQ9BQE3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.02□□□□□ -0.01
TUBA1CQ9BQE3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TUBA1CQ9BQE3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TUBA1CQ9BQE3 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
TUBA1CQ9BQE3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TUBA1CQ9BQE3 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
TUBA1CQ9BQE3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.02□□□□□ -0.01
TUBA1CQ9BQE3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TUBA1CQ9BQE3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 LINC01144-201ENST00000626198 1710 ntBASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 AC092474.2-201ENST00000424288 719 ntBASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 AC109635.5-201ENST00000533593 962 ntBASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 AL135744.1-201ENST00000565098 629 ntBASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 MIR4492-201ENST00000581627 80 ntBASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1CQ9BQE3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TUBA1CQ9BQE3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15□□□□□ -0.01
TUBA1CQ9BQE3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15□□□□□ -0.01
TUBA1CQ9BQE3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TUBA1CQ9BQE3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15□□□□□ -0.01
TUBA1CQ9BQE3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15□□□□□ -0.01
TUBA1CQ9BQE3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15□□□□□ -0.01
TUBA1CQ9BQE3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15□□□□□ -0.01
TUBA1CQ9BQE3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TUBA1CQ9BQE3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15□□□□□ -0.01
TUBA1CQ9BQE3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TUBA1CQ9BQE3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TUBA1CQ9BQE3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms