Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.5■□□□□ 0.23
SMOQ99835 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMOQ99835 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.5■□□□□ 0.23
SMOQ99835 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMOQ99835 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMOQ99835 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.5■□□□□ 0.23
SMOQ99835 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.5■□□□□ 0.23
SMOQ99835 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.5■□□□□ 0.23
SMOQ99835 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.5■□□□□ 0.23
SMOQ99835 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.5■□□□□ 0.23
SMOQ99835 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.5■□□□□ 0.23
SMOQ99835 NME2P1-201ENST00000426182 414 ntBASIC16.5■□□□□ 0.23
SMOQ99835 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.5■□□□□ 0.23
SMOQ99835 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.5■□□□□ 0.23
SMOQ99835 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMOQ99835 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMOQ99835 BRI3BPP1-201ENST00000594224 787 ntBASIC16.5■□□□□ 0.23
SMOQ99835 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.5■□□□□ 0.23
SMOQ99835 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.5■□□□□ 0.23
SMOQ99835 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
SMOQ99835 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMOQ99835 AC008741.2-201ENST00000612792 3115 ntBASIC16.5■□□□□ 0.23
SMOQ99835 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.5■□□□□ 0.23
SMOQ99835 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMOQ99835 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMOQ99835 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMOQ99835 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMOQ99835 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMOQ99835 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMOQ99835 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMOQ99835 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SMOQ99835 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SMOQ99835 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMOQ99835 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.5■□□□□ 0.23
SMOQ99835 AC007950.2-201ENST00000615045 2347 ntBASIC16.5■□□□□ 0.23
SMOQ99835 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SMOQ99835 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMOQ99835 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMOQ99835 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMOQ99835 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMOQ99835 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.49■□□□□ 0.23
SMOQ99835 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMOQ99835 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMOQ99835 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMOQ99835 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.49■□□□□ 0.23
SMOQ99835 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.49■□□□□ 0.23
SMOQ99835 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.49■□□□□ 0.23
SMOQ99835 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.49■□□□□ 0.23
SMOQ99835 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.49■□□□□ 0.23
SMOQ99835 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMOQ99835 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMOQ99835 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMOQ99835 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SMOQ99835 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SMOQ99835 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SMOQ99835 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMOQ99835 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMOQ99835 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMOQ99835 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.49■□□□□ 0.23
SMOQ99835 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.49■□□□□ 0.23
SMOQ99835 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.49■□□□□ 0.23
SMOQ99835 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.49■□□□□ 0.23
SMOQ99835 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.49■□□□□ 0.23
SMOQ99835 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.49■□□□□ 0.23
SMOQ99835 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMOQ99835 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.49■□□□□ 0.23
SMOQ99835 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.49■□□□□ 0.23
SMOQ99835 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.49■□□□□ 0.23
SMOQ99835 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SMOQ99835 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMOQ99835 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMOQ99835 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SMOQ99835 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.49■□□□□ 0.23
SMOQ99835 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMOQ99835 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMOQ99835 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMOQ99835 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.49■□□□□ 0.23
SMOQ99835 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.49■□□□□ 0.23
SMOQ99835 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SMOQ99835 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SMOQ99835 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
SMOQ99835 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.49■□□□□ 0.23
SMOQ99835 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SMOQ99835 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SMOQ99835 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMOQ99835 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SMOQ99835 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
SMOQ99835 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.48■□□□□ 0.23
SMOQ99835 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SMOQ99835 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SMOQ99835 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMOQ99835 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.48■□□□□ 0.23
SMOQ99835 AC092850.2-201ENST00000623821 2697 ntBASIC16.48■□□□□ 0.23
SMOQ99835 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.48■□□□□ 0.23
SMOQ99835 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMOQ99835 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMOQ99835 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMOQ99835 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SMOQ99835 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMOQ99835 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms