Protein–RNA interactions for Protein: Q99788

CMKLR1, Chemokine-like receptor 1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMKLR1Q99788 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.13■□□□□ 0.01
CMKLR1Q99788 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.13■□□□□ 0.01
CMKLR1Q99788 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CMKLR1Q99788 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMKLR1Q99788 AP001282.1-201ENST00000531301 1499 ntBASIC15.13■□□□□ 0.01
CMKLR1Q99788 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMKLR1Q99788 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CMKLR1Q99788 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CMKLR1Q99788 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CMKLR1Q99788 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMKLR1Q99788 AC008894.3-201ENST00000624324 3103 ntBASIC15.12■□□□□ 0.01
CMKLR1Q99788 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CMKLR1Q99788 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMKLR1Q99788 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.12■□□□□ 0.01
CMKLR1Q99788 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CMKLR1Q99788 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.12■□□□□ 0.01
CMKLR1Q99788 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMKLR1Q99788 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMKLR1Q99788 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMKLR1Q99788 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CMKLR1Q99788 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMKLR1Q99788 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMKLR1Q99788 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMKLR1Q99788 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMKLR1Q99788 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMKLR1Q99788 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CMKLR1Q99788 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMKLR1Q99788 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.12■□□□□ 0.01
CMKLR1Q99788 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.12■□□□□ 0.01
CMKLR1Q99788 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.12■□□□□ 0.01
CMKLR1Q99788 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.12■□□□□ 0.01
CMKLR1Q99788 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CMKLR1Q99788 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.12■□□□□ 0.01
CMKLR1Q99788 CTBP2P5-201ENST00000454986 1264 ntBASIC15.12■□□□□ 0.01
CMKLR1Q99788 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.12■□□□□ 0.01
CMKLR1Q99788 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.12■□□□□ 0.01
CMKLR1Q99788 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.12■□□□□ 0.01
CMKLR1Q99788 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.12■□□□□ 0.01
CMKLR1Q99788 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CMKLR1Q99788 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMKLR1Q99788 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.12■□□□□ 0.01
CMKLR1Q99788 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMKLR1Q99788 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMKLR1Q99788 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CMKLR1Q99788 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.12■□□□□ 0.01
CMKLR1Q99788 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CMKLR1Q99788 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMKLR1Q99788 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMKLR1Q99788 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CMKLR1Q99788 INTS4P2-202ENST00000614726 2019 ntBASIC15.12■□□□□ 0.01
CMKLR1Q99788 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CMKLR1Q99788 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMKLR1Q99788 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CMKLR1Q99788 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CMKLR1Q99788 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.12■□□□□ 0.01
CMKLR1Q99788 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CMKLR1Q99788 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CMKLR1Q99788 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CMKLR1Q99788 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CMKLR1Q99788 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CMKLR1Q99788 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CMKLR1Q99788 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CMKLR1Q99788 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CMKLR1Q99788 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CMKLR1Q99788 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CMKLR1Q99788 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.11■□□□□ 0.01
CMKLR1Q99788 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CMKLR1Q99788 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CMKLR1Q99788 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CMKLR1Q99788 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CMKLR1Q99788 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CMKLR1Q99788 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CMKLR1Q99788 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CMKLR1Q99788 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.11■□□□□ 0.01
CMKLR1Q99788 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CMKLR1Q99788 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CMKLR1Q99788 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CMKLR1Q99788 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CMKLR1Q99788 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CMKLR1Q99788 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CMKLR1Q99788 AC074338.1-201ENST00000416825 156 ntBASIC15.11■□□□□ 0.01
CMKLR1Q99788 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CMKLR1Q99788 SLED1-202ENST00000512051 380 ntBASIC15.11■□□□□ 0.01
CMKLR1Q99788 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.11■□□□□ 0.01
CMKLR1Q99788 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CMKLR1Q99788 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CMKLR1Q99788 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.11■□□□□ 0.01
CMKLR1Q99788 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.11■□□□□ 0.01
CMKLR1Q99788 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.11■□□□□ 0.01
CMKLR1Q99788 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.11■□□□□ 0.01
CMKLR1Q99788 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.11■□□□□ 0.01
CMKLR1Q99788 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CMKLR1Q99788 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CMKLR1Q99788 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CMKLR1Q99788 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CMKLR1Q99788 REXO1L8P-201ENST00000604378 1897 ntBASIC15.11■□□□□ 0.01
CMKLR1Q99788 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.11■□□□□ 0.01
CMKLR1Q99788 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CMKLR1Q99788 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CMKLR1Q99788 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms