Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NEK1Q96PY6 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEK1Q96PY6 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.72■□□□□ 0.59
NEK1Q96PY6 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEK1Q96PY6 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEK1Q96PY6 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.72■□□□□ 0.59
NEK1Q96PY6 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEK1Q96PY6 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.72■□□□□ 0.59
NEK1Q96PY6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEK1Q96PY6 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.72■□□□□ 0.59
NEK1Q96PY6 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NEK1Q96PY6 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.72■□□□□ 0.59
NEK1Q96PY6 AC107890.1-201ENST00000422478 521 ntBASIC18.72■□□□□ 0.59
NEK1Q96PY6 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.72■□□□□ 0.59
NEK1Q96PY6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NEK1Q96PY6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.72■□□□□ 0.59
NEK1Q96PY6 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NEK1Q96PY6 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.72■□□□□ 0.59
NEK1Q96PY6 AC069120.2-201ENST00000524091 540 ntBASIC18.72■□□□□ 0.59
NEK1Q96PY6 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.72■□□□□ 0.59
NEK1Q96PY6 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NEK1Q96PY6 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEK1Q96PY6 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.72■□□□□ 0.59
NEK1Q96PY6 AC140878.1-201ENST00000565277 250 ntBASIC18.72■□□□□ 0.59
NEK1Q96PY6 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.72■□□□□ 0.59
NEK1Q96PY6 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.72■□□□□ 0.59
NEK1Q96PY6 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NEK1Q96PY6 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.72■□□□□ 0.59
NEK1Q96PY6 AC073592.8-201ENST00000624126 511 ntBASIC18.72■□□□□ 0.59
NEK1Q96PY6 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.72■□□□□ 0.59
NEK1Q96PY6 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.72■□□□□ 0.59
NEK1Q96PY6 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
NEK1Q96PY6 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEK1Q96PY6 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEK1Q96PY6 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NEK1Q96PY6 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NEK1Q96PY6 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.72■□□□□ 0.59
NEK1Q96PY6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEK1Q96PY6 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NEK1Q96PY6 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NEK1Q96PY6 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NEK1Q96PY6 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
NEK1Q96PY6 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEK1Q96PY6 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NEK1Q96PY6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.72■□□□□ 0.59
NEK1Q96PY6 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.71■□□□□ 0.59
NEK1Q96PY6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEK1Q96PY6 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEK1Q96PY6 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEK1Q96PY6 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
NEK1Q96PY6 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.71■□□□□ 0.59
NEK1Q96PY6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEK1Q96PY6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEK1Q96PY6 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
NEK1Q96PY6 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
NEK1Q96PY6 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEK1Q96PY6 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.71■□□□□ 0.59
NEK1Q96PY6 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEK1Q96PY6 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
NEK1Q96PY6 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
NEK1Q96PY6 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
NEK1Q96PY6 AC074338.1-201ENST00000416825 156 ntBASIC18.71■□□□□ 0.59
NEK1Q96PY6 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.71■□□□□ 0.59
NEK1Q96PY6 SERBP1P3-201ENST00000459980 809 ntBASIC18.71■□□□□ 0.59
NEK1Q96PY6 AC067863.1-201ENST00000494933 530 ntBASIC18.71■□□□□ 0.59
NEK1Q96PY6 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.71■□□□□ 0.59
NEK1Q96PY6 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEK1Q96PY6 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.71■□□□□ 0.59
NEK1Q96PY6 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.71■□□□□ 0.59
NEK1Q96PY6 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEK1Q96PY6 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEK1Q96PY6 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.71■□□□□ 0.59
NEK1Q96PY6 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEK1Q96PY6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEK1Q96PY6 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEK1Q96PY6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NEK1Q96PY6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEK1Q96PY6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
NEK1Q96PY6 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEK1Q96PY6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NEK1Q96PY6 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.7■□□□□ 0.58
NEK1Q96PY6 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
NEK1Q96PY6 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.7■□□□□ 0.58
NEK1Q96PY6 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.7■□□□□ 0.58
NEK1Q96PY6 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.7■□□□□ 0.58
NEK1Q96PY6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NEK1Q96PY6 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEK1Q96PY6 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEK1Q96PY6 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEK1Q96PY6 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NEK1Q96PY6 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEK1Q96PY6 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NEK1Q96PY6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NEK1Q96PY6 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.7■□□□□ 0.58
NEK1Q96PY6 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEK1Q96PY6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NEK1Q96PY6 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEK1Q96PY6 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEK1Q96PY6 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.7■□□□□ 0.58
NEK1Q96PY6 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms