Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC091167.2-201ENST00000579581 588 ntBASIC12.07□□□□□ -0.48
AP1S3Q96PC3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 AL512652.2-201ENST00000625156 1716 ntBASIC12.07□□□□□ -0.48
AP1S3Q96PC3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 AL805961.2-201ENST00000642139 4817 ntBASIC12.07□□□□□ -0.48
AP1S3Q96PC3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.07□□□□□ -0.48
AP1S3Q96PC3 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.06□□□□□ -0.48
AP1S3Q96PC3 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 POM121L3P-201ENST00000419331 1163 ntBASIC12.06□□□□□ -0.48
AP1S3Q96PC3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 ABCD1P5-201ENST00000445663 754 ntBASIC12.06□□□□□ -0.48
AP1S3Q96PC3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 MPDU1-223ENST00000582151 728 ntBASIC12.06□□□□□ -0.48
AP1S3Q96PC3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 LINC01023-201ENST00000606054 436 ntBASIC12.06□□□□□ -0.48
AP1S3Q96PC3 AL121956.5-201ENST00000625261 221 ntBASIC12.06□□□□□ -0.48
AP1S3Q96PC3 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.06□□□□□ -0.48
AP1S3Q96PC3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AP1S3Q96PC3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 AP005117.1-202ENST00000581724 1908 ntBASIC12.05□□□□□ -0.48
AP1S3Q96PC3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 GPAA1P2-202ENST00000606848 1787 ntBASIC12.05□□□□□ -0.48
AP1S3Q96PC3 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 PTPRVP-205ENST00000641549 5067 ntBASIC12.05□□□□□ -0.48
AP1S3Q96PC3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms