Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 TCAF2P1-201ENST00000291129 2421 ntBASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
RTN4IP1Q8WWV3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 CICP24-201ENST00000605464 2705 ntBASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 AC092865.6-201ENST00000642101 219 ntBASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RTN4IP1Q8WWV3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
RTN4IP1Q8WWV3 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 AC090616.6-203ENST00000579186 1945 ntBASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 AC106881.1-201ENST00000605849 3329 ntBASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 MIR574-201ENST00000385209 96 ntBASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 AC002056.1-201ENST00000395613 760 ntBASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 AC040169.1-201ENST00000565382 521 ntBASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 AC105250.1-201ENST00000509378 2057 ntBASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RTN4IP1Q8WWV3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms