Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 FGD5P1-202ENST00000614866 2498 ntBASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 MROH4P-201ENST00000431302 1578 ntBASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 RNA5SP410-201ENST00000516285 106 ntBASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 AL662844.1-201ENST00000546340 181 ntBASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 AC027307.2-201ENST00000591252 911 ntBASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 AC097359.3-201ENST00000603982 1210 ntBASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SLC44A1Q8WWI5 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 AC007967.2-201ENST00000432613 625 ntBASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 AP000347.1-202ENST00000435868 847 ntBASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 HNRNPUP1-201ENST00000554987 333 ntBASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 AL513190.1-201ENST00000621254 727 ntBASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 AC232323.1-201ENST00000540724 2099 ntBASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 REXO1L5P-201ENST00000622260 2098 ntBASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 HLA-A-201ENST00000376802 1334 ntBASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 ZBED1P1-201ENST00000502364 1930 ntBASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 AC026748.1-201ENST00000624349 3251 ntBASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC44A1Q8WWI5 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 LINC00552-201ENST00000625151 2579 ntBASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SLC44A1Q8WWI5 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms