Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SYNPOQ8N3V7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 AL391005.1-201ENST00000623953 2435 ntBASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 DUX4L45-201ENST00000566406 1057 ntBASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 AC244093.1-201ENST00000610837 814 ntBASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 AP001282.1-201ENST00000531301 1499 ntBASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SYNPOQ8N3V7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 PHKG1P2-201ENST00000457537 863 ntBASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 FTH1P14-201ENST00000482930 551 ntBASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 AC000095.1-201ENST00000603208 874 ntBASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.02■□□□□ 0.16
SYNPOQ8N3V7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.02■□□□□ 0.15
SYNPOQ8N3V7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.02■□□□□ 0.15
SYNPOQ8N3V7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SYNPOQ8N3V7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SYNPOQ8N3V7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
SYNPOQ8N3V7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SYNPOQ8N3V7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SYNPOQ8N3V7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SYNPOQ8N3V7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.02■□□□□ 0.15
SYNPOQ8N3V7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SYNPOQ8N3V7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SYNPOQ8N3V7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.02■□□□□ 0.15
SYNPOQ8N3V7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms