Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC65Q8IXS2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC65Q8IXS2 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CCDC65Q8IXS2 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC65Q8IXS2 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CCDC65Q8IXS2 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC65Q8IXS2 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC65Q8IXS2 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC65Q8IXS2 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC65Q8IXS2 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC65Q8IXS2 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC65Q8IXS2 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC65Q8IXS2 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC65Q8IXS2 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC65Q8IXS2 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC65Q8IXS2 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 AC087481.3-201ENST00000602886 1894 ntBASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 METTL21AP1-201ENST00000438852 635 ntBASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 AC140878.1-201ENST00000565277 250 ntBASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 AL138828.2-201ENST00000615812 383 ntBASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 AC073592.8-201ENST00000624126 511 ntBASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC65Q8IXS2 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 SSR4P1-203ENST00000599569 2260 ntBASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 AC022532.1-201ENST00000624563 1728 ntBASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 TMBIM7P-203ENST00000641617 1718 ntBASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 AC006538.3-201ENST00000612495 578 ntBASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 AL033527.5-202ENST00000641632 1098 ntBASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC65Q8IXS2 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms