Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 AZGP1P1-201ENST00000411909 902 ntBASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 RBPMS2P1-201ENST00000437762 623 ntBASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 BANF1P1-201ENST00000553684 263 ntBASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 AC003101.2-201ENST00000612557 442 ntBASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL3Q8IVW4 AC006486.2-201ENST00000624246 2199 ntBASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 AL645939.2-201ENST00000427340 991 ntBASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 GPS2P2-201ENST00000430745 888 ntBASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 AC097359.3-201ENST00000603982 1210 ntBASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 AC009093.7-201ENST00000623853 1223 ntBASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL3Q8IVW4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 AC006058.4-201ENST00000624016 1670 ntBASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 AC138035.3-201ENST00000622706 2791 ntBASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 RPSAP43-201ENST00000402237 625 ntBASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 AC136604.1-201ENST00000418535 575 ntBASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 UPF3AP3-201ENST00000420996 769 ntBASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 SPDYE14P-201ENST00000442619 822 ntBASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 AC112482.1-201ENST00000492080 688 ntBASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms