Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 MIR943-201ENST00000401286 94 ntBASIC14.35□□□□□ -0.11
ATG4DQ86TL0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 TREML5P-201ENST00000421694 576 ntBASIC14.35□□□□□ -0.11
ATG4DQ86TL0 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 KLF2P3-201ENST00000451977 1087 ntBASIC14.35□□□□□ -0.11
ATG4DQ86TL0 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 AC093214.1-201ENST00000511688 1107 ntBASIC14.35□□□□□ -0.11
ATG4DQ86TL0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.35□□□□□ -0.11
ATG4DQ86TL0 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 LINC00554-201ENST00000564841 3011 ntBASIC14.35□□□□□ -0.11
ATG4DQ86TL0 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATG4DQ86TL0 FO538757.1-201ENST00000623083 1397 ntBASIC14.34□□□□□ -0.11
ATG4DQ86TL0 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.34□□□□□ -0.11
ATG4DQ86TL0 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 AC112693.3-201ENST00000624819 1983 ntBASIC14.34□□□□□ -0.11
ATG4DQ86TL0 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.34□□□□□ -0.11
ATG4DQ86TL0 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATG4DQ86TL0 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ATG4DQ86TL0 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ATG4DQ86TL0 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms