Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
SCXQ7RTU7 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SCXQ7RTU7 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC10.59□□□□□ -0.71
SCXQ7RTU7 AC092384.3-202ENST00000564646 2873 ntBASIC10.59□□□□□ -0.71
SCXQ7RTU7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 KRT8P49-201ENST00000604166 1432 ntBASIC10.58□□□□□ -0.72
SCXQ7RTU7 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC10.58□□□□□ -0.72
SCXQ7RTU7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC10.58□□□□□ -0.72
SCXQ7RTU7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC10.58□□□□□ -0.72
SCXQ7RTU7 AC104640.1-201ENST00000562617 2109 ntBASIC10.58□□□□□ -0.72
SCXQ7RTU7 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
SCXQ7RTU7 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
SCXQ7RTU7 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
SCXQ7RTU7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC10.58□□□□□ -0.72
SCXQ7RTU7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC10.58□□□□□ -0.72
SCXQ7RTU7 BAD-202ENST00000394531 631 ntTSL 3 BASIC10.58□□□□□ -0.72
SCXQ7RTU7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC10.58□□□□□ -0.72
SCXQ7RTU7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
SCXQ7RTU7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC10.58□□□□□ -0.72
SCXQ7RTU7 BASP1P1-201ENST00000430708 665 ntBASIC10.58□□□□□ -0.72
SCXQ7RTU7 SPDYE14P-201ENST00000442619 822 ntBASIC10.58□□□□□ -0.72
SCXQ7RTU7 INGX-202ENST00000489074 768 ntBASIC10.58□□□□□ -0.72
SCXQ7RTU7 IGHV3-42-201ENST00000520410 361 ntBASIC10.58□□□□□ -0.72
SCXQ7RTU7 BAD-207ENST00000544785 525 ntTSL 3 BASIC10.58□□□□□ -0.72
SCXQ7RTU7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC10.58□□□□□ -0.72
SCXQ7RTU7 LINC01225-203ENST00000563550 1244 ntBASIC10.58□□□□□ -0.72
SCXQ7RTU7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC10.58□□□□□ -0.72
SCXQ7RTU7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC10.58□□□□□ -0.72
SCXQ7RTU7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC10.58□□□□□ -0.72
SCXQ7RTU7 AJ011932.1-201ENST00000621707 465 ntBASIC10.58□□□□□ -0.72
SCXQ7RTU7 AC008267.7-201ENST00000624570 1194 ntBASIC10.58□□□□□ -0.72
SCXQ7RTU7 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 AC138969.2-201ENST00000532739 9932 ntBASIC10.58□□□□□ -0.72
SCXQ7RTU7 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC10.58□□□□□ -0.72
SCXQ7RTU7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 FES-204ENST00000414248 2327 ntTSL 2 BASIC10.58□□□□□ -0.72
SCXQ7RTU7 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
SCXQ7RTU7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
SCXQ7RTU7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC10.58□□□□□ -0.72
SCXQ7RTU7 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC10.58□□□□□ -0.72
SCXQ7RTU7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 FRMD8P1-201ENST00000440433 1524 ntBASIC10.58□□□□□ -0.72
SCXQ7RTU7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC10.58□□□□□ -0.72
SCXQ7RTU7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC10.58□□□□□ -0.72
SCXQ7RTU7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SCXQ7RTU7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SCXQ7RTU7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC10.57□□□□□ -0.72
SCXQ7RTU7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
SCXQ7RTU7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC10.57□□□□□ -0.72
SCXQ7RTU7 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC10.57□□□□□ -0.72
SCXQ7RTU7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SCXQ7RTU7 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC10.57□□□□□ -0.72
SCXQ7RTU7 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SCXQ7RTU7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC10.57□□□□□ -0.72
SCXQ7RTU7 AC008677.1-201ENST00000519230 1561 ntBASIC10.57□□□□□ -0.72
SCXQ7RTU7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC10.57□□□□□ -0.72
SCXQ7RTU7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
SCXQ7RTU7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SCXQ7RTU7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC10.57□□□□□ -0.72
SCXQ7RTU7 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
SCXQ7RTU7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
SCXQ7RTU7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
SCXQ7RTU7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SCXQ7RTU7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SCXQ7RTU7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SCXQ7RTU7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
SCXQ7RTU7 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC10.57□□□□□ -0.72
SCXQ7RTU7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SCXQ7RTU7 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SCXQ7RTU7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SCXQ7RTU7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SCXQ7RTU7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms